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48 results

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Page 1
Computational pan-genomics: status, promises and challenges.
Computational Pan-Genomics Consortium. Computational Pan-Genomics Consortium. Brief Bioinform. 2018 Jan 1;19(1):118-135. doi: 10.1093/bib/bbw089. Brief Bioinform. 2018. PMID: 27769991 Free PMC article. Review.
Genetic polyploid phasing from low-depth progeny samples.
Schrinner S, Serra Mari R, Finkers R, Arens P, Usadel B, Marschall T, Klau GW. Schrinner S, et al. Among authors: klau gw. iScience. 2022 May 25;25(6):104461. doi: 10.1016/j.isci.2022.104461. eCollection 2022 Jun 17. iScience. 2022. PMID: 35692633 Free PMC article.
eXamine: Visualizing annotated networks in Cytoscape.
Spohr P, Dinkla K, Klau GW, El-Kebir M. Spohr P, et al. Among authors: klau gw. F1000Res. 2018 Apr 30;7:519. doi: 10.12688/f1000research.14612.2. eCollection 2018. F1000Res. 2018. PMID: 29983924 Free PMC article.
Haplotype threading: accurate polyploid phasing from long reads.
Schrinner SD, Mari RS, Ebler J, Rautiainen M, Seillier L, Reimer JJ, Usadel B, Marschall T, Klau GW. Schrinner SD, et al. Among authors: klau gw. Genome Biol. 2020 Sep 21;21(1):252. doi: 10.1186/s13059-020-02158-1. Genome Biol. 2020. PMID: 32951599 Free PMC article.
CLEVER: clique-enumerating variant finder.
Marschall T, Costa IG, Canzar S, Bauer M, Klau GW, Schliep A, Schönhuth A. Marschall T, et al. Among authors: klau gw. Bioinformatics. 2012 Nov 15;28(22):2875-82. doi: 10.1093/bioinformatics/bts566. Epub 2012 Oct 11. Bioinformatics. 2012. PMID: 23060616
OFraMP: a fragment-based tool to facilitate the parametrization of large molecules.
Stroet M, Caron B, Engler MS, van der Woning J, Kauffmann A, van Dijk M, El-Kebir M, Visscher KM, Holownia J, Macfarlane C, Bennion BJ, Gelpi-Dominguez S, Lightstone FC, van der Storm T, Geerke DP, Mark AE, Klau GW. Stroet M, et al. Among authors: klau gw. J Comput Aided Mol Des. 2023 Aug;37(8):357-371. doi: 10.1007/s10822-023-00511-7. Epub 2023 Jun 13. J Comput Aided Mol Des. 2023. PMID: 37310542 Free PMC article.
DALIX: optimal DALI protein structure alignment.
Wohlers I, Andonov R, Klau GW. Wohlers I, et al. Among authors: klau gw. IEEE/ACM Trans Comput Biol Bioinform. 2013 Jan-Feb;10(1):26-36. doi: 10.1109/TCBB.2012.143. IEEE/ACM Trans Comput Biol Bioinform. 2013. PMID: 23702541
48 results