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Community-developed checklists for publishing images and image analyses.
Schmied C, Nelson MS, Avilov S, Bakker GJ, Bertocchi C, Bischof J, Boehm U, Brocher J, Carvalho MT, Chiritescu C, Christopher J, Cimini BA, Conde-Sousa E, Ebner M, Ecker R, Eliceiri K, Fernandez-Rodriguez J, Gaudreault N, Gelman L, Grunwald D, Gu T, Halidi N, Hammer M, Hartley M, Held M, Jug F, Kapoor V, Koksoy AA, Lacoste J, Le Dévédec S, Le Guyader S, Liu P, Martins GG, Mathur A, Miura K, Montero Llopis P, Nitschke R, North A, Parslow AC, Payne-Dwyer A, Plantard L, Ali R, Schroth-Diez B, Schütz L, Scott RT, Seitz A, Selchow O, Sharma VP, Spitaler M, Srinivasan S, Strambio-De-Castillia C, Taatjes D, Tischer C, Jambor HK. Schmied C, et al. Among authors: jug f. Nat Methods. 2024 Feb;21(2):170-181. doi: 10.1038/s41592-023-01987-9. Epub 2023 Sep 14. Nat Methods. 2024. PMID: 37710020 Review.
Live-cell imaging powered by computation.
Shroff H, Testa I, Jug F, Manley S. Shroff H, et al. Among authors: jug f. Nat Rev Mol Cell Biol. 2024 Jun;25(6):443-463. doi: 10.1038/s41580-024-00702-6. Epub 2024 Feb 20. Nat Rev Mol Cell Biol. 2024. PMID: 38378991 Review.
Content-aware image restoration for electron microscopy.
Buchholz TO, Krull A, Shahidi R, Pigino G, Jékely G, Jug F. Buchholz TO, et al. Among authors: jug f. Methods Cell Biol. 2019;152:277-289. doi: 10.1016/bs.mcb.2019.05.001. Epub 2019 Jul 11. Methods Cell Biol. 2019. PMID: 31326025 Review.
Nanog organizes transcription bodies.
Kuznetsova K, Chabot NM, Ugolini M, Wu E, Lalit M, Oda H, Sato Y, Kimura H, Jug F, Vastenhouw NL. Kuznetsova K, et al. Among authors: jug f. Curr Biol. 2023 Jan 9;33(1):164-173.e5. doi: 10.1016/j.cub.2022.11.015. Epub 2022 Dec 6. Curr Biol. 2023. PMID: 36476751 Free article.
CLIJ: GPU-accelerated image processing for everyone.
Haase R, Royer LA, Steinbach P, Schmidt D, Dibrov A, Schmidt U, Weigert M, Maghelli N, Tomancak P, Jug F, Myers EW. Haase R, et al. Among authors: jug f. Nat Methods. 2020 Jan;17(1):5-6. doi: 10.1038/s41592-019-0650-1. Nat Methods. 2020. PMID: 31740823 No abstract available.
Democratising deep learning for microscopy with ZeroCostDL4Mic.
von Chamier L, Laine RF, Jukkala J, Spahn C, Krentzel D, Nehme E, Lerche M, Hernández-Pérez S, Mattila PK, Karinou E, Holden S, Solak AC, Krull A, Buchholz TO, Jones ML, Royer LA, Leterrier C, Shechtman Y, Jug F, Heilemann M, Jacquemet G, Henriques R. von Chamier L, et al. Among authors: jug f. Nat Commun. 2021 Apr 15;12(1):2276. doi: 10.1038/s41467-021-22518-0. Nat Commun. 2021. PMID: 33859193 Free PMC article.
Bioprinting Soft 3D Models of Hematopoiesis using Natural Silk Fibroin-Based Bioink Efficiently Supports Platelet Differentiation.
Di Buduo CA, Lunghi M, Kuzmenko V, Laurent PA, Della Rosa G, Del Fante C, Dalle Nogare DE, Jug F, Perotti C, Eto K, Pecci A, Redwan IN, Balduini A. Di Buduo CA, et al. Among authors: jug f. Adv Sci (Weinh). 2024 May;11(18):e2308276. doi: 10.1002/advs.202308276. Epub 2024 Mar 21. Adv Sci (Weinh). 2024. PMID: 38514919 Free PMC article.
An objective comparison of cell-tracking algorithms.
Ulman V, Maška M, Magnusson KEG, Ronneberger O, Haubold C, Harder N, Matula P, Matula P, Svoboda D, Radojevic M, Smal I, Rohr K, Jaldén J, Blau HM, Dzyubachyk O, Lelieveldt B, Xiao P, Li Y, Cho SY, Dufour AC, Olivo-Marin JC, Reyes-Aldasoro CC, Solis-Lemus JA, Bensch R, Brox T, Stegmaier J, Mikut R, Wolf S, Hamprecht FA, Esteves T, Quelhas P, Demirel Ö, Malmström L, Jug F, Tomancak P, Meijering E, Muñoz-Barrutia A, Kozubek M, Ortiz-de-Solorzano C. Ulman V, et al. Among authors: jug f. Nat Methods. 2017 Dec;14(12):1141-1152. doi: 10.1038/nmeth.4473. Epub 2017 Oct 30. Nat Methods. 2017. PMID: 29083403 Free PMC article.
34 results