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Constraint-based causal discovery with mixed data.
Tsagris M, Borboudakis G, Lagani V, Tsamardinos I. Tsagris M, et al. Among authors: borboudakis g. Int J Data Sci Anal. 2018;6(1):19-30. doi: 10.1007/s41060-018-0097-y. Epub 2018 Feb 2. Int J Data Sci Anal. 2018. PMID: 30957008 Free PMC article.
A data driven approach reveals disease similarity on a molecular level.
Lakiotaki K, Georgakopoulos G, Castanas E, Røe OD, Borboudakis G, Tsamardinos I. Lakiotaki K, et al. Among authors: borboudakis g. NPJ Syst Biol Appl. 2019 Oct 25;5:39. doi: 10.1038/s41540-019-0117-0. eCollection 2019. NPJ Syst Biol Appl. 2019. PMID: 31666984 Free PMC article.
A community computational challenge to predict the activity of pairs of compounds.
Bansal M, Yang J, Karan C, Menden MP, Costello JC, Tang H, Xiao G, Li Y, Allen J, Zhong R, Chen B, Kim M, Wang T, Heiser LM, Realubit R, Mattioli M, Alvarez MJ, Shen Y; NCI-DREAM Community; Gallahan D, Singer D, Saez-Rodriguez J, Xie Y, Stolovitzky G, Califano A; NCI-DREAM Community. Bansal M, et al. Nat Biotechnol. 2014 Dec;32(12):1213-22. doi: 10.1038/nbt.3052. Epub 2014 Nov 17. Nat Biotechnol. 2014. PMID: 25419740 Free PMC article.
A greedy feature selection algorithm for Big Data of high dimensionality.
Tsamardinos I, Borboudakis G, Katsogridakis P, Pratikakis P, Christophides V. Tsamardinos I, et al. Among authors: borboudakis g. Mach Learn. 2019;108(2):149-202. doi: 10.1007/s10994-018-5748-7. Epub 2018 Aug 7. Mach Learn. 2019. PMID: 30906113 Free PMC article.