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Page 1
Placing Ancient DNA Sequences into Reference Phylogenies.
Martiniano R, De Sanctis B, Hallast P, Durbin R. Martiniano R, et al. Mol Biol Evol. 2022 Feb 3;39(2):msac017. doi: 10.1093/molbev/msac017. Mol Biol Evol. 2022. PMID: 35084493 Free PMC article.
Late Quaternary dynamics of Arctic biota from ancient environmental genomics.
Wang Y, Pedersen MW, Alsos IG, De Sanctis B, Racimo F, Prohaska A, Coissac E, Owens HL, Merkel MKF, Fernandez-Guerra A, Rouillard A, Lammers Y, Alberti A, Denoeud F, Money D, Ruter AH, McColl H, Larsen NK, Cherezova AA, Edwards ME, Fedorov GB, Haile J, Orlando L, Vinner L, Korneliussen TS, Beilman DW, Bjørk AA, Cao J, Dockter C, Esdale J, Gusarova G, Kjeldsen KK, Mangerud J, Rasic JT, Skadhauge B, Svendsen JI, Tikhonov A, Wincker P, Xing Y, Zhang Y, Froese DG, Rahbek C, Bravo DN, Holden PB, Edwards NR, Durbin R, Meltzer DJ, Kjær KH, Möller P, Willerslev E. Wang Y, et al. Nature. 2021 Dec;600(7887):86-92. doi: 10.1038/s41586-021-04016-x. Epub 2021 Oct 20. Nature. 2021. PMID: 34671161 Free PMC article.
A theoretical analysis of taxonomic binning accuracy.
De Sanctis B, Money D, Pedersen MW, Durbin R. De Sanctis B, et al. Mol Ecol Resour. 2022 Aug;22(6):2208-2219. doi: 10.1111/1755-0998.13608. Epub 2022 May 4. Mol Ecol Resour. 2022. PMID: 35285150
A 2-million-year-old ecosystem in Greenland uncovered by environmental DNA.
Kjær KH, Winther Pedersen M, De Sanctis B, De Cahsan B, Korneliussen TS, Michelsen CS, Sand KK, Jelavić S, Ruter AH, Schmidt AMA, Kjeldsen KK, Tesakov AS, Snowball I, Gosse JC, Alsos IG, Wang Y, Dockter C, Rasmussen M, Jørgensen ME, Skadhauge B, Prohaska A, Kristensen JÅ, Bjerager M, Allentoft ME, Coissac E; PhyloNorway Consortium; Rouillard A, Simakova A, Fernandez-Guerra A, Bowler C, Macias-Fauria M, Vinner L, Welch JJ, Hidy AJ, Sikora M, Collins MJ, Durbin R, Larsen NK, Willerslev E. Kjær KH, et al. Nature. 2022 Dec;612(7939):283-291. doi: 10.1038/s41586-022-05453-y. Epub 2022 Dec 7. Nature. 2022. PMID: 36477129 Free PMC article.
Environmental genomics of Late Pleistocene black bears and giant short-faced bears.
Pedersen MW, De Sanctis B, Saremi NF, Sikora M, Puckett EE, Gu Z, Moon KL, Kapp JD, Vinner L, Vardanyan Z, Ardelean CF, Arroyo-Cabrales J, Cahill JA, Heintzman PD, Zazula G, MacPhee RDE, Shapiro B, Durbin R, Willerslev E. Pedersen MW, et al. Curr Biol. 2021 Jun 21;31(12):2728-2736.e8. doi: 10.1016/j.cub.2021.04.027. Epub 2021 Apr 19. Curr Biol. 2021. PMID: 33878301 Free article.