U01 CA235493/CA/NCI NIH HHS/United States[Grants and Funding] - Search Results

Year	Number of Results
2019	3
2020	13
2021	6
2022	4
2023	9
2024	8

1

Identification of bioactive metabolites using activity metabolomics.

Rinschen MM, Ivanisevic J, Giera M, Siuzdak G. Rinschen MM, et al. Nat Rev Mol Cell Biol. 2019 Jun;20(6):353-367. doi: 10.1038/s41580-019-0108-4. Nat Rev Mol Cell Biol. 2019. PMID: 30814649 Free PMC article. Review.

2

MetaboAnalyst 5.0: narrowing the gap between raw spectra and functional insights.

Pang Z, Chong J, Zhou G, de Lima Morais DA, Chang L, Barrette M, Gauthier C, Jacques PÉ, Li S, Xia J. Pang Z, et al. Nucleic Acids Res. 2021 Jul 2;49(W1):W388-W396. doi: 10.1093/nar/gkab382. Nucleic Acids Res. 2021. PMID: 34019663 Free PMC article.

3

Pathway Analysis for Targeted and Untargeted Metabolomics.

Karnovsky A, Li S. Karnovsky A, et al. Methods Mol Biol. 2020;2104:387-400. doi: 10.1007/978-1-0716-0239-3_19. Methods Mol Biol. 2020. PMID: 31953827 Review.

4

Hydroxyproline metabolism enhances IFN-γ-induced PD-L1 expression and inhibits autophagic flux.

Spangenberg SH, Palermo A, Gazaniga NR, Martínez-Peña F, Guijas C, Chin EN, Rinschen MM, Sander PN, Webb B, Pereira LE, Jia Y, Meitz L, Siuzdak G, Lairson LL. Spangenberg SH, et al. Cell Chem Biol. 2023 Sep 21;30(9):1115-1134.e10. doi: 10.1016/j.chembiol.2023.06.016. Epub 2023 Jul 18. Cell Chem Biol. 2023. PMID: 37467751 Free PMC article.

5

Tandem Mass Spectrometry across Platforms.

Hoang C, Uritboonthai W, Hoang L, Billings EM, Aisporna A, Nia FA, Derks RJE, Williamson JR, Giera M, Siuzdak G. Hoang C, et al. Anal Chem. 2024 Apr 9;96(14):5478-5488. doi: 10.1021/acs.analchem.3c05576. Epub 2024 Mar 26. Anal Chem. 2024. PMID: 38529642 Free PMC article.

6

Guiding the choice of informatics software and tools for lipidomics research applications.

Ni Z, Wölk M, Jukes G, Mendivelso Espinosa K, Ahrends R, Aimo L, Alvarez-Jarreta J, Andrews S, Andrews R, Bridge A, Clair GC, Conroy MJ, Fahy E, Gaud C, Goracci L, Hartler J, Hoffmann N, Kopczyinki D, Korf A, Lopez-Clavijo AF, Malik A, Ackerman JM, Molenaar MR, O'Donovan C, Pluskal T, Shevchenko A, Slenter D, Siuzdak G, Kutmon M, Tsugawa H, Willighagen EL, Xia J, O'Donnell VB, Fedorova M. Ni Z, et al. Nat Methods. 2023 Feb;20(2):193-204. doi: 10.1038/s41592-022-01710-0. Epub 2022 Dec 21. Nat Methods. 2023. PMID: 36543939 Free PMC article. Review.

7

Network-Based Approaches for Multi-omics Integration.

Zhou G, Li S, Xia J. Zhou G, et al. Methods Mol Biol. 2020;2104:469-487. doi: 10.1007/978-1-0716-0239-3_23. Methods Mol Biol. 2020. PMID: 31953831 Review.

8

MetaboAnalyst 6.0: towards a unified platform for metabolomics data processing, analysis and interpretation.

Pang Z, Lu Y, Zhou G, Hui F, Xu L, Viau C, Spigelman AF, MacDonald PE, Wishart DS, Li S, Xia J. Pang Z, et al. Nucleic Acids Res. 2024 Jul 5;52(W1):W398-W406. doi: 10.1093/nar/gkae253. Nucleic Acids Res. 2024. PMID: 38587201 Free PMC article.

9

Quantitative multiple fragment monitoring with enhanced in-source fragmentation/annotation mass spectrometry.

Bernardo-Bermejo S, Xue J, Hoang L, Billings E, Webb B, Honders MW, Venneker S, Heijs B, Castro-Puyana M, Marina ML, van den Akker EB, Griffioen M, Siuzdak G, Giera M, Sánchez-López E. Bernardo-Bermejo S, et al. Nat Protoc. 2023 Apr;18(4):1296-1315. doi: 10.1038/s41596-023-00803-0. Epub 2023 Feb 8. Nat Protoc. 2023. PMID: 36755131 Free PMC article. Review.

10

Trackable and scalable LC-MS metabolomics data processing using asari.

Li S, Siddiqa A, Thapa M, Chi Y, Zheng S. Li S, et al. Nat Commun. 2023 Jul 11;14(1):4113. doi: 10.1038/s41467-023-39889-1. Nat Commun. 2023. PMID: 37433854 Free PMC article.

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