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VfoldMCPX: predicting multistrand RNA complexes.
Zhang S, Cheng Y, Guo P, Chen SJ. Zhang S, et al. RNA. 2022 Apr;28(4):596-608. doi: 10.1261/rna.079020.121. Epub 2022 Jan 20. RNA. 2022. PMID: 35058350 Free PMC article.
Embracing exascale computing in nucleic acid simulations.
Li J, Zhou Y, Chen SJ. Li J, et al. Curr Opin Struct Biol. 2024 Aug;87:102847. doi: 10.1016/j.sbi.2024.102847. Epub 2024 May 29. Curr Opin Struct Biol. 2024. PMID: 38815519 Free PMC article. Review.
Cracking the Code: Enhancing Molecular Tools for Progress in Nanobiotechnology.
Avila YI, Rebolledo LP, Skelly E, de Freitas Saito R, Wei H, Lilley D, Stanley RE, Hou YM, Yang H, Sztuba-Solinska J, Chen SJ, Dokholyan NV, Tan C, Li SK, He X, Zhang X, Miles W, Franco E, Binzel DW, Guo P, Afonin KA. Avila YI, et al. ACS Appl Bio Mater. 2024 Jun 17;7(6):3587-3604. doi: 10.1021/acsabm.4c00432. Epub 2024 Jun 4. ACS Appl Bio Mater. 2024. PMID: 38833534 Free PMC article. Review.
Cas9-specific immune responses compromise local and systemic AAV CRISPR therapy in multiple dystrophic canine models.
Hakim CH, Kumar SRP, Pérez-López DO, Wasala NB, Zhang D, Yue Y, Teixeira J, Pan X, Zhang K, Million ED, Nelson CE, Metzger S, Han J, Louderman JA, Schmidt F, Feng F, Grimm D, Smith BF, Yao G, Yang NN, Gersbach CA, Chen SJ, Herzog RW, Duan D. Hakim CH, et al. Nat Commun. 2021 Nov 24;12(1):6769. doi: 10.1038/s41467-021-26830-7. Nat Commun. 2021. PMID: 34819506 Free PMC article.
An RNA aptamer that shifts the reduction potential of metabolic cofactors.
Samuelian JS, Gremminger TJ, Song Z, Poudyal RR, Li J, Zhou Y, Staller SA, Carballo JA, Roychowdhury-Saha M, Chen SJ, Burke DH, Heng X, Baum DA. Samuelian JS, et al. Nat Chem Biol. 2022 Nov;18(11):1263-1269. doi: 10.1038/s41589-022-01121-4. Epub 2022 Sep 12. Nat Chem Biol. 2022. PMID: 36097297 Free PMC article.
37 results