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Standardized annotation of translated open reading frames.
Mudge JM, Ruiz-Orera J, Prensner JR, Brunet MA, Calvet F, Jungreis I, Gonzalez JM, Magrane M, Martinez TF, Schulz JF, Yang YT, Albà MM, Aspden JL, Baranov PV, Bazzini AA, Bruford E, Martin MJ, Calviello L, Carvunis AR, Chen J, Couso JP, Deutsch EW, Flicek P, Frankish A, Gerstein M, Hubner N, Ingolia NT, Kellis M, Menschaert G, Moritz RL, Ohler U, Roucou X, Saghatelian A, Weissman JS, van Heesch S. Mudge JM, et al. Nat Biotechnol. 2022 Jul;40(7):994-999. doi: 10.1038/s41587-022-01369-0. Nat Biotechnol. 2022. PMID: 35831657 Free PMC article. No abstract available.
Enhanced RNA-targeting CRISPR-Cas technology in zebrafish.
Moreno-Sanchez I, Hernandez-Huertas L, Nahon-Cano D, Gomez-Marin C, Martinez-García PM, Treichel AJ, Tomas-Gallardo L, da Silva Pescador G, Kushawah G, Díaz-Moscoso A, Cano-Ruiz A, Walker JA 2nd, Muñoz MJ, Holden K, Galcerán J, Nieto MÁ, Bazzini A, Moreno-Mateos MA. Moreno-Sanchez I, et al. bioRxiv [Preprint]. 2024 Oct 9:2024.10.08.617220. doi: 10.1101/2024.10.08.617220. bioRxiv. 2024. PMID: 39416004 Free PMC article. Preprint.
High-quality peptide evidence for annotating non-canonical open reading frames as human proteins.
Deutsch EW, Kok LW, Mudge JM, Ruiz-Orera J, Fierro-Monti I, Sun Z, Abelin JG, Alba MM, Aspden JL, Bazzini AA, Bruford EA, Brunet MA, Calviello L, Carr SA, Carvunis AR, Chothani S, Clauwaert J, Dean K, Faridi P, Frankish A, Hubner N, Ingolia NT, Magrane M, Martin MJ, Martinez TF, Menschaert G, Ohler U, Orchard S, Rackham O, Roucou X, Slavoff SA, Valen E, Wacholder A, Weissman JS, Wu W, Xie Z, Choudhary J, Bassani-Sternberg M, Vizcaíno JA, Ternette N, Moritz RL, Prensner JR, van Heesch S. Deutsch EW, et al. bioRxiv [Preprint]. 2024 Sep 9:2024.09.09.612016. doi: 10.1101/2024.09.09.612016. bioRxiv. 2024. PMID: 39314370 Free PMC article. Preprint.
Optimized CRISPR-RfxCas13d system for RNA targeting in zebrafish embryos.
Hernandez-Huertas L, Kushawah G, Diaz-Moscoso A, Tomas-Gallardo L, Moreno-Sanchez I, da Silva Pescador G, Bazzini AA, Moreno-Mateos MA. Hernandez-Huertas L, et al. STAR Protoc. 2021 Dec 23;3(1):101058. doi: 10.1016/j.xpro.2021.101058. eCollection 2022 Mar 18. STAR Protoc. 2021. PMID: 35005640 Free PMC article.
12 results