Time-resolved cryo-EM of G-protein activation by a GPCR

Nature. 2024 May;629(8014):1182-1191. doi: 10.1038/s41586-024-07153-1. Epub 2024 Mar 13.

Abstract

G-protein-coupled receptors (GPCRs) activate heterotrimeric G proteins by stimulating guanine nucleotide exchange in the Gα subunit1. To visualize this mechanism, we developed a time-resolved cryo-EM approach that examines the progression of ensembles of pre-steady-state intermediates of a GPCR-G-protein complex. By monitoring the transitions of the stimulatory Gs protein in complex with the β2-adrenergic receptor at short sequential time points after GTP addition, we identified the conformational trajectory underlying G-protein activation and functional dissociation from the receptor. Twenty structures generated from sequential overlapping particle subsets along this trajectory, compared to control structures, provide a high-resolution description of the order of main events driving G-protein activation in response to GTP binding. Structural changes propagate from the nucleotide-binding pocket and extend through the GTPase domain, enacting alterations to Gα switch regions and the α5 helix that weaken the G-protein-receptor interface. Molecular dynamics simulations with late structures in the cryo-EM trajectory support that enhanced ordering of GTP on closure of the α-helical domain against the nucleotide-bound Ras-homology domain correlates with α5 helix destabilization and eventual dissociation of the G protein from the GPCR. These findings also highlight the potential of time-resolved cryo-EM as a tool for mechanistic dissection of GPCR signalling events.

MeSH terms

  • Binding Sites
  • Cryoelectron Microscopy*
  • Enzyme Activation / drug effects
  • GTP-Binding Protein alpha Subunits, Gs* / chemistry
  • GTP-Binding Protein alpha Subunits, Gs* / drug effects
  • GTP-Binding Protein alpha Subunits, Gs* / metabolism
  • GTP-Binding Protein alpha Subunits, Gs* / ultrastructure
  • Guanosine Triphosphate / metabolism
  • Guanosine Triphosphate / pharmacology
  • Humans
  • Models, Molecular
  • Molecular Dynamics Simulation
  • Protein Binding
  • Protein Domains
  • Protein Structure, Secondary
  • Receptors, Adrenergic, beta-2* / chemistry
  • Receptors, Adrenergic, beta-2* / metabolism
  • Receptors, Adrenergic, beta-2* / ultrastructure
  • Signal Transduction / drug effects
  • Time Factors

Substances

  • GTP-Binding Protein alpha Subunits, Gs
  • Guanosine Triphosphate
  • Receptors, Adrenergic, beta-2