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Topic modeling for untargeted substructure exploration in metabolomics.
van der Hooft JJ, Wandy J, Barrett MP, Burgess KE, Rogers S. van der Hooft JJ, et al. Proc Natl Acad Sci U S A. 2016 Nov 29;113(48):13738-13743. doi: 10.1073/pnas.1608041113. Epub 2016 Nov 16. Proc Natl Acad Sci U S A. 2016. PMID: 27856765 Free PMC article.
Repression of the Type I Interferon Pathway Underlies MYC- and KRAS-Dependent Evasion of NK and B Cells in Pancreatic Ductal Adenocarcinoma.
Muthalagu N, Monteverde T, Raffo-Iraolagoitia X, Wiesheu R, Whyte D, Hedley A, Laing S, Kruspig B, Upstill-Goddard R, Shaw R, Neidler S, Rink C, Karim SA, Gyuraszova K, Nixon C, Clark W, Biankin AV, Carlin LM, Coffelt SB, Sansom OJ, Morton JP, Murphy DJ. Muthalagu N, et al. Cancer Discov. 2020 Jun;10(6):872-887. doi: 10.1158/2159-8290.CD-19-0620. Epub 2020 Mar 21. Cancer Discov. 2020. PMID: 32200350 Free PMC article.
Ranking Metabolite Sets by Their Activity Levels.
McLuskey K, Wandy J, Vincent I, van der Hooft JJJ, Rogers S, Burgess K, Daly R. McLuskey K, et al. Metabolites. 2021 Feb 11;11(2):103. doi: 10.3390/metabo11020103. Metabolites. 2021. PMID: 33670102 Free PMC article.
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