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SARCP, a Clinical Next-Generation Sequencing Assay for the Detection of Gene Fusions in Sarcomas: A Description of the First 652 Cases.
Atiq MA, Balan J, Blackburn PR, Gross JM, Voss JS, Jin L, Fadra N, Davila JI, Pitel BA, Siqueira Parrilha Terra SB, Minn KT, Jackson RA, Hofich CD, Willkomm KS, Peterson BJ, Clausen SN, Rumilla KM, Gupta S, Lo YC, Ida CM, Molligan JF, Thangaiah JJ, Petersen MJ, Sukov WR, Guo R, Giannini C, Schoolmeester JK 2nd, Fritchie K, Inwards CY, Folpe AL, Oliveira AM, Torres-Mora J, Kipp BR, Halling KC. Atiq MA, et al. Among authors: halling kc. J Mol Diagn. 2024 Nov 7:S1525-1578(24)00273-3. doi: 10.1016/j.jmoldx.2024.10.004. Online ahead of print. J Mol Diagn. 2024. PMID: 39521244
Development and Verification of an RNA Sequencing (RNA-Seq) Assay for the Detection of Gene Fusions in Tumors.
Winters JL, Davila JI, McDonald AM, Nair AA, Fadra N, Wehrs RN, Thomas BC, Balcom JR, Jin L, Wu X, Voss JS, Klee EW, Oliver GR, Graham RP, Neff JL, Rumilla KM, Aypar U, Kipp BR, Jenkins RB, Jen J, Halling KC. Winters JL, et al. Among authors: halling kc. J Mol Diagn. 2018 Jul;20(4):495-511. doi: 10.1016/j.jmoldx.2018.03.007. Epub 2018 Jun 19. J Mol Diagn. 2018. PMID: 29929942 Free article.
RNA sequencing identifies a novel USP9X-USP6 promoter swap gene fusion in a primary aneurysmal bone cyst.
Blackburn PR, Davila JI, Jackson RA, Fadra N, Atiq MA, Pitel BA, Nair AA, VanDeWalker TJ, Hessler MG, Hovel SK, Wehrs RN, Fritchie KJ, Jenkins RB, Halling KC, Geiersbach KB. Blackburn PR, et al. Among authors: halling kc. Genes Chromosomes Cancer. 2019 Aug;58(8):589-594. doi: 10.1002/gcc.22742. Epub 2019 Mar 6. Genes Chromosomes Cancer. 2019. PMID: 30767316
Uterine inflammatory myofibroblastic tumors in pregnant women with and without involvement of the placenta: a study of 6 cases with identification of a novel TIMP3-RET fusion.
Cheek EH, Fadra N, Jackson RA, Davila JI, Sukov WR, Uckerman MT, Clayton A, Keeney GL, Halling KC, Torres-Mora J, Schoolmeester JK. Cheek EH, et al. Among authors: halling kc. Hum Pathol. 2020 Mar;97:29-39. doi: 10.1016/j.humpath.2019.12.006. Epub 2020 Jan 7. Hum Pathol. 2020. PMID: 31917155
RNA-Seq Reveals Differences in Expressed Tumor Mutation Burden in Colorectal and Endometrial Cancers with and without Defective DNA-Mismatch Repair.
DiGuardo MA, Davila JI, Jackson RA, Nair AA, Fadra N, Minn KT, Atiq MA, Zarei S, Blommel JH, Knight SM, Jen J, Eckloff BW, Voss JS, Rumilla KM, Kerr SE, Lam-Himlin DM, Bellizzi AM, Graham RP, Kipp BR, Jenkins RB, Halling KC. DiGuardo MA, et al. Among authors: halling kc. J Mol Diagn. 2021 May;23(5):555-564. doi: 10.1016/j.jmoldx.2021.01.008. Epub 2021 Feb 4. J Mol Diagn. 2021. PMID: 33549857 Free article.
SeekFusion - A Clinically Validated Fusion Transcript Detection Pipeline for PCR-Based Next-Generation Sequencing of RNA.
Balan J, Jenkinson G, Nair A, Saha N, Koganti T, Voss J, Zysk C, Barr Fritcher EG, Ross CA, Giannini C, Raghunathan A, Kipp BR, Jenkins R, Ida C, Halling KC, Blackburn PR, Dasari S, Oliver GR, Klee EW. Balan J, et al. Among authors: halling kc. Front Genet. 2021 Oct 22;12:739054. doi: 10.3389/fgene.2021.739054. eCollection 2021. Front Genet. 2021. PMID: 34745213 Free PMC article.
181 results