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Spatiotemporal lineage tracing reveals the dynamic spatial architecture of tumor growth and metastasis.
Jones MG, Sun D, Min KHJ, Colgan WN, Tian L, Weir JA, Chen VZ, Koblan LW, Yost KE, Mathey-Andrews N, Russell AJC, Stickels RR, Balderrama KS, Rideout WM 3rd, Chang HY, Jacks T, Chen F, Weissman JS, Yosef N, Yang D. Jones MG, et al. Among authors: chen vz, chen f. bioRxiv [Preprint]. 2024 Oct 24:2024.10.21.619529. doi: 10.1101/2024.10.21.619529. bioRxiv. 2024. PMID: 39484491 Free PMC article. Preprint.
The expanding vistas of spatial transcriptomics.
Tian L, Chen F, Macosko EZ. Tian L, et al. Among authors: chen f. Nat Biotechnol. 2023 Jun;41(6):773-782. doi: 10.1038/s41587-022-01448-2. Epub 2022 Oct 3. Nat Biotechnol. 2023. PMID: 36192637 Free PMC article. Review.
The cell type composition of the adult mouse brain revealed by single cell and spatial genomics.
Langlieb J, Sachdev NS, Balderrama KS, Nadaf NM, Raj M, Murray E, Webber JT, Vanderburg C, Gazestani V, Tward D, Mezias C, Li X, Cable DM, Norton T, Mitra P, Chen F, Macosko EZ. Langlieb J, et al. Among authors: chen f. bioRxiv [Preprint]. 2023 Mar 13:2023.03.06.531307. doi: 10.1101/2023.03.06.531307. bioRxiv. 2023. PMID: 36945580 Free PMC article. Preprint.
Evolutionary fingerprints of EMT in pancreatic cancers.
Perelli L, Zhang L, Mangiameli S, Russell AJC, Giannese F, Peng F, Carbone F, Le C, Khan H, Citron F, Soeung M, Lam TNA, Lundgren S, Zhu C, Catania D, Feng N, Gurreri E, Sgambato A, Tortora G, Draetta GF, Tonon G, Futreal A, Giuliani V, Carugo A, Viale A, Heffernan TP, Wang L, Cittaro D, Chen F, Genovese G. Perelli L, et al. Among authors: chen f. bioRxiv [Preprint]. 2023 Sep 19:2023.09.18.558231. doi: 10.1101/2023.09.18.558231. bioRxiv. 2023. PMID: 37786705 Free PMC article. Preprint.
Slide-tags enables single-nucleus barcoding for multimodal spatial genomics.
Russell AJC, Weir JA, Nadaf NM, Shabet M, Kumar V, Kambhampati S, Raichur R, Marrero GJ, Liu S, Balderrama KS, Vanderburg CR, Shanmugam V, Tian L, Iorgulescu JB, Yoon CH, Wu CJ, Macosko EZ, Chen F. Russell AJC, et al. Among authors: chen f. Nature. 2024 Jan;625(7993):101-109. doi: 10.1038/s41586-023-06837-4. Epub 2023 Dec 13. Nature. 2024. PMID: 38093010 Free PMC article.
Publisher Correction: Slide-tags enables single-nucleus barcoding for multimodal spatial genomics.
Russell AJC, Weir JA, Nadaf NM, Shabet M, Kumar V, Kambhampati S, Raichur R, Marrero GJ, Liu S, Balderrama KS, Vanderburg CR, Shanmugam V, Tian L, Iorgulescu JB, Yoon CH, Wu CJ, Macosko EZ, Chen F. Russell AJC, et al. Among authors: chen f. Nature. 2024 Jan;625(7994):E11. doi: 10.1038/s41586-023-06961-1. Nature. 2024. PMID: 38110579 Free PMC article. No abstract available.
Molecular logic of cellular diversification in the mouse cerebral cortex.
Di Bella DJ, Habibi E, Stickels RR, Scalia G, Brown J, Yadollahpour P, Yang SM, Abbate C, Biancalani T, Macosko EZ, Chen F, Regev A, Arlotta P. Di Bella DJ, et al. Among authors: chen f. Nature. 2021 Jul;595(7868):554-559. doi: 10.1038/s41586-021-03670-5. Epub 2021 Jun 23. Nature. 2021. PMID: 34163074 Free PMC article.
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