Zhao L - Search Results

1

Predicting transcriptional responses to novel chemical perturbations using deep generative model for drug discovery.

Qi X, Zhao L, Tian C, Li Y, Chen ZL, Huo P, Chen R, Liu X, Wan B, Yang S, Zhao Y. Qi X, et al. Among authors: zhao y, zhao l. Nat Commun. 2024 Oct 26;15(1):9256. doi: 10.1038/s41467-024-53457-1. Nat Commun. 2024. PMID: 39462106 Free PMC article.

2

DeepOmix: A scalable and interpretable multi-omics deep learning framework and application in cancer survival analysis.

Zhao L, Dong Q, Luo C, Wu Y, Bu D, Qi X, Luo Y, Zhao Y. Zhao L, et al. Among authors: zhao y. Comput Struct Biotechnol J. 2021 May 1;19:2719-2725. doi: 10.1016/j.csbj.2021.04.067. eCollection 2021. Comput Struct Biotechnol J. 2021. PMID: 34093987 Free PMC article.

3

TREAT: Therapeutic RNAs exploration inspired by artificial intelligence technology.

Luo Y, Liu L, He Z, Zhang S, Huo P, Wang Z, Jiaxin Q, Zhao L, Wu Y, Zhang D, Bu D, Chen R, Zhao Y. Luo Y, et al. Among authors: zhao y, zhao l. Comput Struct Biotechnol J. 2022 Oct 8;20:5680-5689. doi: 10.1016/j.csbj.2022.10.011. eCollection 2022. Comput Struct Biotechnol J. 2022. PMID: 36320935 Free PMC article.

4

Biological knowledge graph-guided investigation of immune therapy response in cancer with graph neural network.

Zhao L, Qi X, Chen Y, Qiao Y, Bu D, Wu Y, Luo Y, Wang S, Zhang R, Zhao Y. Zhao L, et al. Among authors: zhao y. Brief Bioinform. 2023 Mar 19;24(2):bbad023. doi: 10.1093/bib/bbad023. Brief Bioinform. 2023. PMID: 36682018

5

DeepFusion: A deep bimodal information fusion network for unraveling protein-RNA interactions using in vivo RNA structures.

Qiao Y, Yang R, Liu Y, Chen J, Zhao L, Huo P, Wang Z, Bu D, Wu Y, Zhao Y. Qiao Y, et al. Among authors: zhao y, zhao l. Comput Struct Biotechnol J. 2023 Dec 30;23:617-625. doi: 10.1016/j.csbj.2023.12.040. eCollection 2024 Dec. Comput Struct Biotechnol J. 2023. PMID: 38274994 Free PMC article.

6

NONCODEV5: a comprehensive annotation database for long non-coding RNAs.

Fang S, Zhang L, Guo J, Niu Y, Wu Y, Li H, Zhao L, Li X, Teng X, Sun X, Sun L, Zhang MQ, Chen R, Zhao Y. Fang S, et al. Among authors: zhao y, zhao l. Nucleic Acids Res. 2018 Jan 4;46(D1):D308-D314. doi: 10.1093/nar/gkx1107. Nucleic Acids Res. 2018. PMID: 29140524 Free PMC article.

7

HERB: a high-throughput experiment- and reference-guided database of traditional Chinese medicine.

Fang S, Dong L, Liu L, Guo J, Zhao L, Zhang J, Bu D, Liu X, Huo P, Cao W, Dong Q, Wu J, Zeng X, Wu Y, Zhao Y. Fang S, et al. Among authors: zhao y, zhao l. Nucleic Acids Res. 2021 Jan 8;49(D1):D1197-D1206. doi: 10.1093/nar/gkaa1063. Nucleic Acids Res. 2021. PMID: 33264402 Free PMC article.

8

KOBAS-i: intelligent prioritization and exploratory visualization of biological functions for gene enrichment analysis.

Bu D, Luo H, Huo P, Wang Z, Zhang S, He Z, Wu Y, Zhao L, Liu J, Guo J, Fang S, Cao W, Yi L, Zhao Y, Kong L. Bu D, et al. Among authors: zhao y, zhao l. Nucleic Acids Res. 2021 Jul 2;49(W1):W317-W325. doi: 10.1093/nar/gkab447. Nucleic Acids Res. 2021. PMID: 34086934 Free PMC article.

9

Corrigendum to "TREAT: Therapeutic RNAs exploration inspired by artificial intelligence technology" [Comput Struct Biotechnol J 20 (2022) 5680-5689].

Luo Y, Liu L, He Z, Zhang S, Huo P, Wang Z, Jiaxin Q, Zhao L, Wu Y, Zhang D, Bu D, Chen R, Zhao Y. Luo Y, et al. Among authors: zhao y, zhao l. Comput Struct Biotechnol J. 2023 Jul 13;21:3540. doi: 10.1016/j.csbj.2023.05.018. eCollection 2023. Comput Struct Biotechnol J. 2023. PMID: 37484489 Free PMC article.

10

NONCODEV6: an updated database dedicated to long non-coding RNA annotation in both animals and plants.

Zhao L, Wang J, Li Y, Song T, Wu Y, Fang S, Bu D, Li H, Sun L, Pei D, Zheng Y, Huang J, Xu M, Chen R, Zhao Y, He S. Zhao L, et al. Among authors: zhao y. Nucleic Acids Res. 2021 Jan 8;49(D1):D165-D171. doi: 10.1093/nar/gkaa1046. Nucleic Acids Res. 2021. PMID: 33196801 Free PMC article.

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