Li YY - Search Results

1

SpatialRef: a reference of spatial omics with known spot annotation.

Cui T, Li YY, Li BL, Zhang H, Yu TT, Zhang JN, Qian FC, Yin MX, Fang QL, Hu ZH, Yan YX, Wang QY, Li CQ, Shang DS. Cui T, et al. Among authors: li yy, li cq, li bl. Nucleic Acids Res. 2024 Oct 17:gkae892. doi: 10.1093/nar/gkae892. Online ahead of print. Nucleic Acids Res. 2024. PMID: 39417483

2

TRCirc: a resource for transcriptional regulation information of circRNAs.

Tang Z, Li X, Zhao J, Qian F, Feng C, Li Y, Zhang J, Jiang Y, Yang Y, Wang Q, Li C. Tang Z, et al. Brief Bioinform. 2019 Nov 27;20(6):2327-2333. doi: 10.1093/bib/bby083. Brief Bioinform. 2019. PMID: 30184150

3

ReCirc: prediction of circRNA expression and function through probe reannotation of non-circRNA microarrays.

Zhao J, Li X, Guo J, Li M, Zhang J, Ding J, Li S, Tang Z, Qian F, Li Y, Wang Q, Li C, Li E, Xu L. Zhao J, et al. Mol Omics. 2019 Apr 1;15(2):150-163. doi: 10.1039/c8mo00252e. Epub 2019 Mar 27. Mol Omics. 2019. PMID: 30916068

4

SEanalysis: a web tool for super-enhancer associated regulatory analysis.

Qian FC, Li XC, Guo JC, Zhao JM, Li YY, Tang ZD, Zhou LW, Zhang J, Bai XF, Jiang Y, Pan Q, Wang QY, Li EM, Li CQ, Xu LY, Lin DC. Qian FC, et al. Among authors: li yy, li cq, li em, li xc. Nucleic Acids Res. 2019 Jul 2;47(W1):W248-W255. doi: 10.1093/nar/gkz302. Nucleic Acids Res. 2019. PMID: 31028388 Free PMC article.

5

KnockTF: a comprehensive human gene expression profile database with knockdown/knockout of transcription factors.

Feng C, Song C, Liu Y, Qian F, Gao Y, Ning Z, Wang Q, Jiang Y, Li Y, Li M, Chen J, Zhang J, Li C. Feng C, et al. Nucleic Acids Res. 2020 Jan 8;48(D1):D93-D100. doi: 10.1093/nar/gkz881. Nucleic Acids Res. 2020. PMID: 31598675 Free PMC article.

6

ENdb: a manually curated database of experimentally supported enhancers for human and mouse.

Bai X, Shi S, Ai B, Jiang Y, Liu Y, Han X, Xu M, Pan Q, Wang F, Wang Q, Zhang J, Li X, Feng C, Li Y, Wang Y, Song Y, Feng K, Li C. Bai X, et al. Nucleic Acids Res. 2020 Jan 8;48(D1):D51-D57. doi: 10.1093/nar/gkz973. Nucleic Acids Res. 2020. PMID: 31665430 Free PMC article.

7

TRlnc: a comprehensive database for human transcriptional regulatory information of lncRNAs.

Li Y, Li X, Yang Y, Li M, Qian F, Tang Z, Zhao J, Zhang J, Bai X, Jiang Y, Zhou J, Zhang Y, Zhou L, Xie J, Li E, Wang Q, Li C. Li Y, et al. Brief Bioinform. 2021 Mar 22;22(2):1929-1939. doi: 10.1093/bib/bbaa011. Brief Bioinform. 2021. PMID: 32047897

8

Characterization of super-enhancer-associated functional lncRNAs acting as ceRNAs in ESCC.

Wang QY, Peng L, Chen Y, Liao LD, Chen JX, Li M, Li YY, Qian FC, Zhang YX, Wang F, Li CQ, Lin DC, Xu LY, Li EM. Wang QY, et al. Among authors: li yy, li cq, li m, li em. Mol Oncol. 2020 Sep;14(9):2203-2230. doi: 10.1002/1878-0261.12726. Epub 2020 Jun 20. Mol Oncol. 2020. PMID: 32460441 Free PMC article.

9

LncSEA: a platform for long non-coding RNA related sets and enrichment analysis.

Chen J, Zhang J, Gao Y, Li Y, Feng C, Song C, Ning Z, Zhou X, Zhao J, Feng M, Zhang Y, Wei L, Pan Q, Jiang Y, Qian F, Han J, Yang Y, Wang Q, Li C. Chen J, et al. Nucleic Acids Res. 2021 Jan 8;49(D1):D969-D980. doi: 10.1093/nar/gkaa806. Nucleic Acids Res. 2021. PMID: 33045741 Free PMC article.

10

ATACdb: a comprehensive human chromatin accessibility database.

Wang F, Bai X, Wang Y, Jiang Y, Ai B, Zhang Y, Liu Y, Xu M, Wang Q, Han X, Pan Q, Li Y, Li X, Zhang J, Zhao J, Zhang G, Feng C, Zhu J, Li C. Wang F, et al. Nucleic Acids Res. 2021 Jan 8;49(D1):D55-D64. doi: 10.1093/nar/gkaa943. Nucleic Acids Res. 2021. PMID: 33125076 Free PMC article.

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