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Page 1
Cross-species single-cell spatial transcriptomic atlases of the cerebellar cortex.
Hao S, Zhu X, Huang Z, Yang Q, Liu H, Wu Y, Zhan Y, Dong Y, Li C, Wang H, Haasdijk E, Wu Z, Li S, Yan H, Zhu L, Guo S, Wang Z, Ye A, Lin Y, Cui L, Tan X, Liu H, Wang M, Chen J, Zhong Y, Du W, Wang G, Lai T, Cao M, Yang T, Xu Y, Li L, Yu Q, Zhuang Z, Xia Y, Lei Y, An Y, Cheng M, Zhao Y, Han L, Yuan Y, Song X, Song Y, Gu L, Liu C, Lin X, Wang R, Wang Z, Wang Y, Li S, Li H, Song J, Chen M, Zhou W, Yuan N, Sun S, Wang S, Chen Y, Zheng M, Fang J, Zhang R, Zhang S, Chai Q, Liu J, Wei W, He J, Zhou H, Sun Y, Liu Z, Liu C, Yao J, Liang Z, Xu X, Poo M, Li C, De Zeeuw CI, Shen Z, Liu Z, Liu L, Liu S, Sun Y, Liu C. Hao S, et al. Among authors: du w. Science. 2024 Sep 27;385(6716):eado3927. doi: 10.1126/science.ado3927. Epub 2024 Sep 27. Science. 2024. PMID: 39325889
Cell transcriptomic atlas of the non-human primate Macaca fascicularis.
Han L, Wei X, Liu C, Volpe G, Zhuang Z, Zou X, Wang Z, Pan T, Yuan Y, Zhang X, Fan P, Guo P, Lai Y, Lei Y, Liu X, Yu F, Shangguan S, Lai G, Deng Q, Liu Y, Wu L, Shi Q, Yu H, Huang Y, Cheng M, Xu J, Liu Y, Wang M, Wang C, Zhang Y, Xie D, Yang Y, Yu Y, Zheng H, Wei Y, Huang F, Lei J, Huang W, Zhu Z, Lu H, Wang B, Wei X, Chen F, Yang T, Du W, Chen J, Xu S, An J, Ward C, Wang Z, Pei Z, Wong CW, Liu X, Zhang H, Liu M, Qin B, Schambach A, Isern J, Feng L, Liu Y, Guo X, Liu Z, Sun Q, Maxwell PH, Barker N, Muñoz-Cánoves P, Gu Y, Mulder J, Uhlen M, Tan T, Liu S, Yang H, Wang J, Hou Y, Xu X, Esteban MA, Liu L. Han L, et al. Among authors: du w. Nature. 2022 Apr;604(7907):723-731. doi: 10.1038/s41586-022-04587-3. Epub 2022 Apr 13. Nature. 2022. PMID: 35418686
A spatiotemporal atlas of cholestatic injury and repair in mice.
Wu B, Shentu X, Nan H, Guo P, Hao S, Xu J, Shangguan S, Cui L, Cen J, Deng Q, Wu Y, Liu C, Song Y, Lin X, Wang Z, Yuan Y, Ma W, Li R, Li Y, Qian Q, Du W, Lai T, Yang T, Liu C, Ma X, Chen A, Xu X, Lai Y, Liu L, Esteban MA, Hui L. Wu B, et al. Among authors: du w. Nat Genet. 2024 May;56(5):938-952. doi: 10.1038/s41588-024-01687-w. Epub 2024 Apr 16. Nat Genet. 2024. PMID: 38627596
A spatiotemporal atlas of mouse liver homeostasis and regeneration.
Xu J, Guo P, Hao S, Shangguan S, Shi Q, Volpe G, Huang K, Zuo J, An J, Yuan Y, Cheng M, Deng Q, Zhang X, Lai G, Nan H, Wu B, Shentu X, Wu L, Wei X, Jiang Y, Huang X, Pan F, Song Y, Li R, Wang Z, Liu C, Liu S, Li Y, Yang T, Xu Z, Du W, Li L, Ahmed T, You K, Dai Z, Li L, Qin B, Li Y, Lai L, Qin D, Chen J, Fan R, Li Y, Hou J, Ott M, Sharma AD, Cantz T, Schambach A, Kristiansen K, Hutchins AP, Göttgens B, Maxwell PH, Hui L, Xu X, Liu L, Chen A, Lai Y, Esteban MA. Xu J, et al. Among authors: du w. Nat Genet. 2024 May;56(5):953-969. doi: 10.1038/s41588-024-01709-7. Epub 2024 Apr 16. Nat Genet. 2024. PMID: 38627598
High-resolution 3D spatiotemporal transcriptomic maps of developing Drosophila embryos and larvae.
Wang M, Hu Q, Lv T, Wang Y, Lan Q, Xiang R, Tu Z, Wei Y, Han K, Shi C, Guo J, Liu C, Yang T, Du W, An Y, Cheng M, Xu J, Lu H, Li W, Zhang S, Chen A, Chen W, Li Y, Wang X, Xu X, Hu Y, Liu L. Wang M, et al. Among authors: du w. Dev Cell. 2022 May 23;57(10):1271-1283.e4. doi: 10.1016/j.devcel.2022.04.006. Epub 2022 May 4. Dev Cell. 2022. PMID: 35512700 Free article.
CDCP: a visualization and analyzing platform for single-cell datasets.
Li Y, Yang T, Lai T, You L, Yang F, Qiu J, Wang L, Du W, Hua C, Xu Z, Cai J, Li Z, Liu Y, Li L, Zhang M, Chen J, Zhang L, Chen D, Wang W, Liu S, Wu L, Zeng W, Wang B, Wei X, Liu L, Chen F. Li Y, et al. Among authors: du w. J Genet Genomics. 2022 Jul;49(7):689-692. doi: 10.1016/j.jgg.2021.12.004. Epub 2021 Dec 29. J Genet Genomics. 2022. PMID: 34973426 No abstract available.
STOmicsDB: a comprehensive database for spatial transcriptomics data sharing, analysis and visualization.
Xu Z, Wang W, Yang T, Li L, Ma X, Chen J, Wang J, Huang Y, Gould J, Lu H, Du W, Sahu SK, Yang F, Li Z, Hu Q, Hua C, Hu S, Liu Y, Cai J, You L, Zhang Y, Li Y, Zeng W, Chen A, Wang B, Liu L, Chen F, Ma K, Xu X, Wei X. Xu Z, et al. Among authors: du w. Nucleic Acids Res. 2024 Jan 5;52(D1):D1053-D1061. doi: 10.1093/nar/gkad933. Nucleic Acids Res. 2024. PMID: 37953328 Free PMC article.
LettuceDB: an integrated multi-omics database for cultivated lettuce.
Zhou W, Yang T, Zeng L, Chen J, Wang Y, Guo X, You L, Liu Y, Du W, Yang F, Hua C, Cai J, van Hintum T, Liu H, Gu Y, Wei X, Wei T. Zhou W, et al. Among authors: du w. Database (Oxford). 2024 Apr 1;2024:baae018. doi: 10.1093/database/baae018. Database (Oxford). 2024. PMID: 38557635 Free PMC article.
PIRD: Pan Immune Repertoire Database.
Zhang W, Wang L, Liu K, Wei X, Yang K, Du W, Wang S, Guo N, Ma C, Luo L, Wu J, Lin L, Yang F, Gao F, Wang X, Li T, Zhang R, Saksena NK, Yang H, Wang J, Fang L, Hou Y, Xu X, Liu X. Zhang W, et al. Among authors: du w. Bioinformatics. 2020 Feb 1;36(3):897-903. doi: 10.1093/bioinformatics/btz614. Bioinformatics. 2020. PMID: 31373607
Access to RNA-sequencing data from 1,173 plant species: The 1000 Plant transcriptomes initiative (1KP).
Carpenter EJ, Matasci N, Ayyampalayam S, Wu S, Sun J, Yu J, Jimenez Vieira FR, Bowler C, Dorrell RG, Gitzendanner MA, Li L, Du W, K Ullrich K, Wickett NJ, Barkmann TJ, Barker MS, Leebens-Mack JH, Wong GK. Carpenter EJ, et al. Among authors: du w. Gigascience. 2019 Oct 1;8(10):giz126. doi: 10.1093/gigascience/giz126. Gigascience. 2019. PMID: 31644802 Free PMC article.
6,117 results