De Vivo M - Search Results

1

Correct Nucleotide Selection Is Confined at the Binding Site of Polymerase Enzymes.

Figueroa Blanco DR, Vidossich P, De Vivo M. Figueroa Blanco DR, et al. Among authors: de vivo m. J Chem Inf Model. 2024 Jul 8;64(13):5285-5294. doi: 10.1021/acs.jcim.4c00696. Epub 2024 Jun 20. J Chem Inf Model. 2024. PMID: 38901009

2

A Self-Activated Mechanism for Nucleic Acid Polymerization Catalyzed by DNA/RNA Polymerases.

Genna V, Vidossich P, Ippoliti E, Carloni P, De Vivo M. Genna V, et al. Among authors: de vivo m. J Am Chem Soc. 2016 Nov 9;138(44):14592-14598. doi: 10.1021/jacs.6b05475. Epub 2016 Aug 31. J Am Chem Soc. 2016. PMID: 27530537 Free article.

3

Smoothed Potential MD Simulations for Dissociation Kinetics of Etoposide To Unravel Isoform Specificity in Targeting Human Topoisomerase II.

Kuriappan JA, Osheroff N, De Vivo M. Kuriappan JA, et al. Among authors: de vivo m. J Chem Inf Model. 2019 Sep 23;59(9):4007-4017. doi: 10.1021/acs.jcim.9b00605. Epub 2019 Sep 9. J Chem Inf Model. 2019. PMID: 31449404 Free PMC article.

4

Visualizing group II intron dynamics between the first and second steps of splicing.

Manigrasso J, Chillón I, Genna V, Vidossich P, Somarowthu S, Pyle AM, De Vivo M, Marcia M. Manigrasso J, et al. Among authors: de vivo m. Nat Commun. 2020 Jun 5;11(1):2837. doi: 10.1038/s41467-020-16741-4. Nat Commun. 2020. PMID: 32503992 Free PMC article.

5

Finding the Ion in the RNA-Stack: Can Computational Models Accurately Predict Key Functional Elements in Large Macromolecular Complexes?

Marcia M, Manigrasso J, De Vivo M. Marcia M, et al. Among authors: de vivo m. J Chem Inf Model. 2021 Jun 28;61(6):2511-2515. doi: 10.1021/acs.jcim.1c00572. Epub 2021 Jun 16. J Chem Inf Model. 2021. PMID: 34133879 Free PMC article.

6

Author Correction: Visualizing group II intron dynamics between the first and second steps of splicing.

Manigrasso J, Chillón I, Genna V, Vidossich P, Somarowthu S, Pyle AM, De Vivo M, Marcia M. Manigrasso J, et al. Among authors: de vivo m. Nat Commun. 2022 Jan 4;13(1):1. doi: 10.1038/s41467-021-27699-2. Nat Commun. 2022. PMID: 34983933 Free PMC article. No abstract available.

7

Structural basis for inhibition of the Cation-chloride cotransporter NKCC1 by the diuretic drug bumetanide.

Zhao Y, Roy K, Vidossich P, Cancedda L, De Vivo M, Forbush B, Cao E. Zhao Y, et al. Among authors: de vivo m. Nat Commun. 2022 May 18;13(1):2747. doi: 10.1038/s41467-022-30407-3. Nat Commun. 2022. PMID: 35585053 Free PMC article.

8

Alchemical Free Energy Calculations to Investigate Protein-Protein Interactions: the Case of the CDC42/PAK1 Complex.

La Serra MA, Vidossich P, Acquistapace I, Ganesan AK, De Vivo M. La Serra MA, et al. Among authors: de vivo m. J Chem Inf Model. 2022 Jun 27;62(12):3023-3033. doi: 10.1021/acs.jcim.2c00348. Epub 2022 Jun 9. J Chem Inf Model. 2022. PMID: 35679463 Free PMC article.

9

Structure of the human cation-chloride cotransport KCC1 in an outward-open state.

Zhao Y, Shen J, Wang Q, Ruiz Munevar MJ, Vidossich P, De Vivo M, Zhou M, Cao E. Zhao Y, et al. Among authors: de vivo m. Proc Natl Acad Sci U S A. 2022 Jul 5;119(27):e2109083119. doi: 10.1073/pnas.2109083119. Epub 2022 Jun 27. Proc Natl Acad Sci U S A. 2022. PMID: 35759661 Free PMC article.

10

Direct observation of backtracking by influenza A and B polymerases upon consecutive incorporation of the nucleoside analog T1106.

Kouba T, Dubankova A, Drncova P, Donati E, Vidossich P, Speranzini V, Pflug A, Huchting J, Meier C, De Vivo M, Cusack S. Kouba T, et al. Among authors: de vivo m. Cell Rep. 2023 Jan 31;42(1):111901. doi: 10.1016/j.celrep.2022.111901. Epub 2023 Jan 2. Cell Rep. 2023. PMID: 36596301 Free article.

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