Bojar D - Search Results

1

O-glycosylation contributes to mammalian glycoRNA biogenesis.

Porat J, Watkins CP, Jin C, Xie X, Tan X, Lebedenko CG, Hemberger H, Shin W, Chai P, Collins JJ, Garcia BA, Bojar D, Flynn RA. Porat J, et al. Among authors: bojar d. bioRxiv [Preprint]. 2024 Aug 29:2024.08.28.610074. doi: 10.1101/2024.08.28.610074. bioRxiv. 2024. PMID: 39257776 Free PMC article. Preprint.

2

Navigating the maze of mass spectra: a machine-learning guide to identifying diagnostic ions in O-glycan analysis.

Urban J, Joeres R, Thomès L, Thomsson KA, Bojar D. Urban J, et al. Among authors: bojar d. Anal Bioanal Chem. 2024 Aug 24. doi: 10.1007/s00216-024-05500-9. Online ahead of print. Anal Bioanal Chem. 2024. PMID: 39180595

3

Predicting glycan structure from tandem mass spectrometry via deep learning.

Urban J, Jin C, Thomsson KA, Karlsson NG, Ives CM, Fadda E, Bojar D. Urban J, et al. Among authors: bojar d. Nat Methods. 2024 Jul;21(7):1206-1215. doi: 10.1038/s41592-024-02314-6. Epub 2024 Jul 1. Nat Methods. 2024. PMID: 38951670 Free PMC article.

4

Can We Improve the Technique of Pelvic Floor Muscle Exercises in Postmenopausal Women Using a Single Electromyography Biofeedback Session? An Experimental Study.

Piernicka M, Ossowski Z, Kortas J, Bojar D, Labun J, Szumilewicz A. Piernicka M, et al. Among authors: bojar d. J Clin Med. 2024 May 23;13(11):3062. doi: 10.3390/jcm13113062. J Clin Med. 2024. PMID: 38892773 Free PMC article.

5

Decoding glycosylation potential from protein structure across human glycoproteins with a multi-view recurrent neural network.

Kellman BP, Mariethoz J, Zhang Y, Shaul S, Alteri M, Sandoval D, Jeffris M, Armingol E, Bao B, Lisacek F, Bojar D, Lewis NE. Kellman BP, et al. Among authors: bojar d. bioRxiv [Preprint]. 2024 May 23:2024.05.15.594334. doi: 10.1101/2024.05.15.594334. bioRxiv. 2024. PMID: 38798633 Free PMC article. Preprint.

6

Syntactic sugars: crafting a regular expression framework for glycan structures.

Bennett AR, Bojar D. Bennett AR, et al. Among authors: bojar d. Bioinform Adv. 2024 Apr 19;4(1):vbae059. doi: 10.1093/bioadv/vbae059. eCollection 2024. Bioinform Adv. 2024. PMID: 38708029 Free PMC article.

7

Protocol for constructing glycan biosynthetic networks using glycowork.

Lundstrøm J, Thomès L, Bojar D. Lundstrøm J, et al. Among authors: bojar d. STAR Protoc. 2024 Jun 21;5(2):102937. doi: 10.1016/j.xpro.2024.102937. Epub 2024 Apr 16. STAR Protoc. 2024. PMID: 38630592 Free PMC article.

8

Elucidating the glycan-binding specificity and structure of Cucumis melo agglutinin, a new R-type lectin.

Lundstrøm J, Gillon E, Chazalet V, Kerekes N, Di Maio A, Feizi T, Liu Y, Varrot A, Bojar D. Lundstrøm J, et al. Among authors: bojar d. Beilstein J Org Chem. 2024 Feb 19;20:306-320. doi: 10.3762/bjoc.20.31. eCollection 2024. Beilstein J Org Chem. 2024. PMID: 38410776 Free PMC article.

9

The evolving world of milk oligosaccharides: Biochemical diversity understood by computational advances.

Lundstrøm J, Bojar D. Lundstrøm J, et al. Among authors: bojar d. Carbohydr Res. 2024 Mar;537:109069. doi: 10.1016/j.carres.2024.109069. Epub 2024 Feb 22. Carbohydr Res. 2024. PMID: 38402731 Free article. Review.

10

Decoding glycomics with a suite of methods for differential expression analysis.

Lundstrøm J, Urban J, Bojar D. Lundstrøm J, et al. Among authors: bojar d. Cell Rep Methods. 2023 Dec 18;3(12):100652. doi: 10.1016/j.crmeth.2023.100652. Epub 2023 Nov 21. Cell Rep Methods. 2023. PMID: 37992708 Free PMC article.

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