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From Planning Stage Towards FAIR Data: A Practical Metadatasheet For Biomedical Scientists.
Seep L, Grein S, Splichalova I, Ran D, Mikhael M, Hildebrand S, Lauterbach M, Hiller K, Ribeiro DJS, Sieckmann K, Kardinal R, Huang H, Yu J, Kallabis S, Behrens J, Till A, Peeva V, Strohmeyer A, Bruder J, Blum T, Soriano-Arroquia A, Tischer D, Kuellmer K, Li Y, Beyer M, Gellner AK, Fromme T, Wackerhage H, Klingenspor M, Fenske WK, Scheja L, Meissner F, Schlitzer A, Mass E, Wachten D, Latz E, Pfeifer A, Hasenauer J. Seep L, et al. Among authors: hasenauer j. Sci Data. 2024 May 22;11(1):524. doi: 10.1038/s41597-024-03349-2. Sci Data. 2024. PMID: 38778016 Free PMC article.
PEtab-Interoperable specification of parameter estimation problems in systems biology.
Schmiester L, Schälte Y, Bergmann FT, Camba T, Dudkin E, Egert J, Fröhlich F, Fuhrmann L, Hauber AL, Kemmer S, Lakrisenko P, Loos C, Merkt S, Müller W, Pathirana D, Raimúndez E, Refisch L, Rosenblatt M, Stapor PL, Städter P, Wang D, Wieland FG, Banga JR, Timmer J, Villaverde AF, Sahle S, Kreutz C, Hasenauer J, Weindl D. Schmiester L, et al. Among authors: hasenauer j. PLoS Comput Biol. 2021 Jan 26;17(1):e1008646. doi: 10.1371/journal.pcbi.1008646. eCollection 2021 Jan. PLoS Comput Biol. 2021. PMID: 33497393 Free PMC article.
A protocol for dynamic model calibration.
Villaverde AF, Pathirana D, Fröhlich F, Hasenauer J, Banga JR. Villaverde AF, et al. Among authors: hasenauer j. Brief Bioinform. 2022 Jan 17;23(1):bbab387. doi: 10.1093/bib/bbab387. Brief Bioinform. 2022. PMID: 34619769 Free PMC article.
Network plasticity of pluripotency transcription factors in embryonic stem cells.
Filipczyk A, Marr C, Hastreiter S, Feigelman J, Schwarzfischer M, Hoppe PS, Loeffler D, Kokkaliaris KD, Endele M, Schauberger B, Hilsenbeck O, Skylaki S, Hasenauer J, Anastassiadis K, Theis FJ, Schroeder T. Filipczyk A, et al. Among authors: hasenauer j. Nat Cell Biol. 2015 Oct;17(10):1235-46. doi: 10.1038/ncb3237. Epub 2015 Sep 21. Nat Cell Biol. 2015. PMID: 26389663
139 results