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WormBase 2024: status and transitioning to Alliance infrastructure.
Sternberg PW, Van Auken K, Wang Q, Wright A, Yook K, Zarowiecki M, Arnaboldi V, Becerra A, Brown S, Cain S, Chan J, Chen WJ, Cho J, Davis P, Diamantakis S, Dyer S, Grigoriadis D, Grove CA, Harris T, Howe K, Kishore R, Lee R, Longden I, Luypaert M, Müller HM, Nuin P, Quinton-Tulloch M, Raciti D, Schedl T, Schindelman G, Stein L. Sternberg PW, et al. Among authors: lee r. Genetics. 2024 May 7;227(1):iyae050. doi: 10.1093/genetics/iyae050. Genetics. 2024. PMID: 38573366 Free PMC article.
WormBase 2017: molting into a new stage.
Lee RYN, Howe KL, Harris TW, Arnaboldi V, Cain S, Chan J, Chen WJ, Davis P, Gao S, Grove C, Kishore R, Muller HM, Nakamura C, Nuin P, Paulini M, Raciti D, Rodgers F, Russell M, Schindelman G, Tuli MA, Van Auken K, Wang Q, Williams G, Wright A, Yook K, Berriman M, Kersey P, Schedl T, Stein L, Sternberg PW. Lee RYN, et al. Nucleic Acids Res. 2018 Jan 4;46(D1):D869-D874. doi: 10.1093/nar/gkx998. Nucleic Acids Res. 2018. PMID: 29069413 Free PMC article.
WormBase: a modern Model Organism Information Resource.
Harris TW, Arnaboldi V, Cain S, Chan J, Chen WJ, Cho J, Davis P, Gao S, Grove CA, Kishore R, Lee RYN, Muller HM, Nakamura C, Nuin P, Paulini M, Raciti D, Rodgers FH, Russell M, Schindelman G, Auken KV, Wang Q, Williams G, Wright AJ, Yook K, Howe KL, Schedl T, Stein L, Sternberg PW. Harris TW, et al. Among authors: lee ryn. Nucleic Acids Res. 2020 Jan 8;48(D1):D762-D767. doi: 10.1093/nar/gkz920. Nucleic Acids Res. 2020. PMID: 31642470 Free PMC article.
WormBase in 2022-data, processes, and tools for analyzing Caenorhabditis elegans.
Davis P, Zarowiecki M, Arnaboldi V, Becerra A, Cain S, Chan J, Chen WJ, Cho J, da Veiga Beltrame E, Diamantakis S, Gao S, Grigoriadis D, Grove CA, Harris TW, Kishore R, Le T, Lee RYN, Luypaert M, Müller HM, Nakamura C, Nuin P, Paulini M, Quinton-Tulloch M, Raciti D, Rodgers FH, Russell M, Schindelman G, Singh A, Stickland T, Van Auken K, Wang Q, Williams G, Wright AJ, Yook K, Berriman M, Howe KL, Schedl T, Stein L, Sternberg PW. Davis P, et al. Among authors: lee ryn. Genetics. 2022 Apr 4;220(4):iyac003. doi: 10.1093/genetics/iyac003. Genetics. 2022. PMID: 35134929 Free PMC article.
WormBase 2007.
Rogers A, Antoshechkin I, Bieri T, Blasiar D, Bastiani C, Canaran P, Chan J, Chen WJ, Davis P, Fernandes J, Fiedler TJ, Han M, Harris TW, Kishore R, Lee R, McKay S, Müller HM, Nakamura C, Ozersky P, Petcherski A, Schindelman G, Schwarz EM, Spooner W, Tuli MA, Van Auken K, Wang D, Wang X, Williams G, Yook K, Durbin R, Stein LD, Spieth J, Sternberg PW. Rogers A, et al. Among authors: lee r. Nucleic Acids Res. 2008 Jan;36(Database issue):D612-7. doi: 10.1093/nar/gkm975. Epub 2007 Nov 8. Nucleic Acids Res. 2008. PMID: 17991679 Free PMC article.
WormBase: a comprehensive resource for nematode research.
Harris TW, Antoshechkin I, Bieri T, Blasiar D, Chan J, Chen WJ, De La Cruz N, Davis P, Duesbury M, Fang R, Fernandes J, Han M, Kishore R, Lee R, Müller HM, Nakamura C, Ozersky P, Petcherski A, Rangarajan A, Rogers A, Schindelman G, Schwarz EM, Tuli MA, Van Auken K, Wang D, Wang X, Williams G, Yook K, Durbin R, Stein LD, Spieth J, Sternberg PW. Harris TW, et al. Among authors: lee r. Nucleic Acids Res. 2010 Jan;38(Database issue):D463-7. doi: 10.1093/nar/gkp952. Epub 2009 Nov 12. Nucleic Acids Res. 2010. PMID: 19910365 Free PMC article.
WormBase 2012: more genomes, more data, new website.
Yook K, Harris TW, Bieri T, Cabunoc A, Chan J, Chen WJ, Davis P, de la Cruz N, Duong A, Fang R, Ganesan U, Grove C, Howe K, Kadam S, Kishore R, Lee R, Li Y, Muller HM, Nakamura C, Nash B, Ozersky P, Paulini M, Raciti D, Rangarajan A, Schindelman G, Shi X, Schwarz EM, Ann Tuli M, Van Auken K, Wang D, Wang X, Williams G, Hodgkin J, Berriman M, Durbin R, Kersey P, Spieth J, Stein L, Sternberg PW. Yook K, et al. Among authors: lee r. Nucleic Acids Res. 2012 Jan;40(Database issue):D735-41. doi: 10.1093/nar/gkr954. Epub 2011 Nov 8. Nucleic Acids Res. 2012. PMID: 22067452 Free PMC article.
WormBase 2014: new views of curated biology.
Harris TW, Baran J, Bieri T, Cabunoc A, Chan J, Chen WJ, Davis P, Done J, Grove C, Howe K, Kishore R, Lee R, Li Y, Muller HM, Nakamura C, Ozersky P, Paulini M, Raciti D, Schindelman G, Tuli MA, Van Auken K, Wang D, Wang X, Williams G, Wong JD, Yook K, Schedl T, Hodgkin J, Berriman M, Kersey P, Spieth J, Stein L, Sternberg PW. Harris TW, et al. Among authors: lee r. Nucleic Acids Res. 2014 Jan;42(Database issue):D789-93. doi: 10.1093/nar/gkt1063. Epub 2013 Nov 4. Nucleic Acids Res. 2014. PMID: 24194605 Free PMC article.
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