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Visualization and quality control tools for large-scale multiplex tissue analysis in TissUUmaps3.
Biol Imaging. 2023 Feb 20;3:e6. doi: 10.1017/S2633903X23000053. eCollection 2023.
Biol Imaging. 2023.
PMID: 38487686
Free PMC article.
DEPICTER: Deep representation clustering for histology annotation.
Chelebian E, Avenel C, Ciompi F, Wählby C.
Chelebian E, et al.
Comput Biol Med. 2024 Mar;170:108026. doi: 10.1016/j.compbiomed.2024.108026. Epub 2024 Jan 26.
Comput Biol Med. 2024.
PMID: 38308865
Free article.
Item in Clipboard
TissUUmaps 3: Improvements in interactive visualization, exploration, and quality assessment of large-scale spatial omics data.
Pielawski N, Andersson A, Avenel C, Behanova A, Chelebian E, Klemm A, Nysjö F, Solorzano L, Wählby C.
Pielawski N, et al. Among authors: chelebian e.
Heliyon. 2023 Apr 17;9(5):e15306. doi: 10.1016/j.heliyon.2023.e15306. eCollection 2023 May.
Heliyon. 2023.
PMID: 37131430
Free PMC article.
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Morphological Features Extracted by AI Associated with Spatial Transcriptomics in Prostate Cancer.
Chelebian E, Avenel C, Kartasalo K, Marklund M, Tanoglidi A, Mirtti T, Colling R, Erickson A, Lamb AD, Lundeberg J, Wählby C.
Chelebian E, et al.
Cancers (Basel). 2021 Sep 28;13(19):4837. doi: 10.3390/cancers13194837.
Cancers (Basel). 2021.
PMID: 34638322
Free PMC article.
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Differential effect of vascularity between long- and short-term survivors with IDH1/2 wild-type glioblastoma.
Álvarez-Torres MDM, Fuster-García E, Reynés G, Juan-Albarracín J, Chelebian E, Oleaga L, Pineda J, Auger C, Rovira A, Emblem KE, Filice S, Mollà-Olmos E, García-Gómez JM.
Álvarez-Torres MDM, et al. Among authors: chelebian e.
NMR Biomed. 2021 Apr;34(4):e4462. doi: 10.1002/nbm.4462. Epub 2021 Jan 19.
NMR Biomed. 2021.
PMID: 33470039
Free article.
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Higher vascularity at infiltrated peripheral edema differentiates proneural glioblastoma subtype.
Chelebian E, Fuster-Garcia E, Álvarez-Torres MDM, Juan-Albarracín J, García-Gómez JM.
Chelebian E, et al.
PLoS One. 2020 Oct 14;15(10):e0232500. doi: 10.1371/journal.pone.0232500. eCollection 2020.
PLoS One. 2020.
PMID: 33052913
Free PMC article.
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MGMT methylation may benefit overall survival in patients with moderately vascularized glioblastomas.
Fuster-Garcia E, Lorente Estellés D, Álvarez-Torres MDM, Juan-Albarracín J, Chelebian E, Rovira A, Acosta CA, Pineda J, Oleaga L, Mollá-Olmos E, Filice S, Due-Tønnessen P, Meling TR, Emblem KE, García-Gómez JM.
Fuster-Garcia E, et al. Among authors: chelebian e.
Eur Radiol. 2021 Mar;31(3):1738-1747. doi: 10.1007/s00330-020-07297-4. Epub 2020 Oct 1.
Eur Radiol. 2021.
PMID: 33001310
Free PMC article.
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Robust association between vascular habitats and patient prognosis in glioblastoma: An international multicenter study.
Del Mar Álvarez-Torres M, Juan-Albarracín J, Fuster-Garcia E, Bellvís-Bataller F, Lorente D, Reynés G, Font de Mora J, Aparici-Robles F, Botella C, Muñoz-Langa J, Faubel R, Asensio-Cuesta S, García-Ferrando GA, Chelebian E, Auger C, Pineda J, Rovira A, Oleaga L, Mollà-Olmos E, Revert AJ, Tshibanda L, Crisi G, Emblem KE, Martin D, Due-Tønnessen P, Meling TR, Filice S, Sáez C, García-Gómez JM.
Del Mar Álvarez-Torres M, et al. Among authors: chelebian e.
J Magn Reson Imaging. 2020 May;51(5):1478-1486. doi: 10.1002/jmri.26958. Epub 2019 Oct 26.
J Magn Reson Imaging. 2020.
PMID: 31654541
Free article.
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