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Page 1
Petabase-scale sequence alignment catalyses viral discovery.
Edgar RC, Taylor B, Lin V, Altman T, Barbera P, Meleshko D, Lohr D, Novakovsky G, Buchfink B, Al-Shayeb B, Banfield JF, de la Peña M, Korobeynikov A, Chikhi R, Babaian A. Edgar RC, et al. Among authors: babaian a. Nature. 2022 Feb;602(7895):142-147. doi: 10.1038/s41586-021-04332-2. Epub 2022 Jan 26. Nature. 2022. PMID: 35082445
Hybrids of RNA viruses and viroid-like elements replicate in fungi.
Forgia M, Navarro B, Daghino S, Cervera A, Gisel A, Perotto S, Aghayeva DN, Akinyuwa MF, Gobbi E, Zheludev IN, Edgar RC, Chikhi R, Turina M, Babaian A, Di Serio F, de la Peña M. Forgia M, et al. Among authors: babaian a. Nat Commun. 2023 May 5;14(1):2591. doi: 10.1038/s41467-023-38301-2. Nat Commun. 2023. PMID: 37147358 Free PMC article.
A parasite odyssey: An RNA virus concealed in Toxoplasma gondii.
Gupta P, Hiller A, Chowdhury J, Lim D, Lim DY, Saeij JPJ, Babaian A, Rodriguez F, Pereira L, Morales-Tapia A. Gupta P, et al. Among authors: babaian a. Virus Evol. 2024 May 11;10(1):veae040. doi: 10.1093/ve/veae040. eCollection 2024. Virus Evol. 2024. PMID: 38817668 Free PMC article.
Viroid-like colonists of human microbiomes.
Zheludev IN, Edgar RC, Lopez-Galiano MJ, de la Peña M, Babaian A, Bhatt AS, Fire AZ. Zheludev IN, et al. Among authors: babaian a. Cell. 2024 Nov 14;187(23):6521-6536.e18. doi: 10.1016/j.cell.2024.09.033. Epub 2024 Oct 30. Cell. 2024. PMID: 39481381
ICTV Virus Taxonomy Profile: Kolmioviridae 2024.
Kuhn JH, Babaian A, Bergner LM, Dény P, Glebe D, Horie M, Koonin EV, Krupovic M, Paraskevopoulou S, de la Peña M, Smura T, Hepojoki J. Kuhn JH, et al. Among authors: babaian a. J Gen Virol. 2024 Feb;105(2):001963. doi: 10.1099/jgv.0.001963. J Gen Virol. 2024. PMID: 38421275 Free PMC article.
Petabase-Scale Homology Search for Structure Prediction.
Lee S, Kim G, Karin EL, Mirdita M, Park S, Chikhi R, Babaian A, Kryshtafovych A, Steinegger M. Lee S, et al. Among authors: babaian a. Cold Spring Harb Perspect Biol. 2024 May 2;16(5):a041465. doi: 10.1101/cshperspect.a041465. Cold Spring Harb Perspect Biol. 2024. PMID: 38316555 Review.
The International Virus Bioinformatics Meeting 2023.
Hufsky F, Abecasis AB, Babaian A, Beck S, Brierley L, Dellicour S, Eggeling C, Elena SF, Gieraths U, Ha AD, Harvey W, Jones TC, Lamkiewicz K, Lovate GL, Lücking D, Machyna M, Nishimura L, Nocke MK, Renard BY, Sakaguchi S, Sakellaridi L, Spangenberg J, Tarradas-Alemany M, Triebel S, Vakulenko Y, Wijesekara RY, González-Candelas F, Krautwurst S, Pérez-Cataluña A, Randazzo W, Sánchez G, Marz M. Hufsky F, et al. Among authors: babaian a. Viruses. 2023 Sep 30;15(10):2031. doi: 10.3390/v15102031. Viruses. 2023. PMID: 37896809 Free PMC article.
49 results