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Page 1
Lightning Pose: improved animal pose estimation via semi-supervised learning, Bayesian ensembling and cloud-native open-source tools.
Biderman D, Whiteway MR, Hurwitz C, Greenspan N, Lee RS, Vishnubhotla A, Warren R, Pedraja F, Noone D, Schartner MM, Huntenburg JM, Khanal A, Meijer GT, Noel JP, Pan-Vazquez A, Socha KZ, Urai AE; International Brain Laboratory; Cunningham JP, Sawtell NB, Paninski L. Biderman D, et al. Among authors: huntenburg jm. Nat Methods. 2024 Jul;21(7):1316-1328. doi: 10.1038/s41592-024-02319-1. Epub 2024 Jun 25. Nat Methods. 2024. PMID: 38918605
Interactive data exploration websites for large-scale electrophysiology.
Birman D, Chapuis G, Faulkner M, Rossant C; International Brain Laboratory; Benson J, Catarino JA, Churchland AK, Hu F, Huntenburg JM, Khanal A, Krasniak C, Lau PYP, Meijer GT, Miska NJ, Noel JP, Pan-Vazquez A, Roth N, Schartner M, Socha KZ, Steinmetz NA, Urai AE, Wells MJ, West SJ, Winter O. Birman D, et al. Among authors: huntenburg jm. bioRxiv [Preprint]. 2024 Jun 14:2024.06.07.597950. doi: 10.1101/2024.06.07.597950. bioRxiv. 2024. PMID: 38915704 Free PMC article. Preprint.
Decreased long-range temporal correlations in the resting-state functional magnetic resonance imaging blood-oxygen-level-dependent signal reflect motor sequence learning up to 2 weeks following training.
Jäger AP, Bailey A, Huntenburg JM, Tardif CL, Villringer A, Gauthier CJ, Nikulin V, Bazin PL, Steele CJ. Jäger AP, et al. Among authors: huntenburg jm. Hum Brain Mapp. 2024 Mar;45(4):e26539. doi: 10.1002/hbm.26539. Epub 2023 Dec 20. Hum Brain Mapp. 2024. PMID: 38124341 Free PMC article.
Lightning Pose: improved animal pose estimation via semi-supervised learning, Bayesian ensembling, and cloud-native open-source tools.
Biderman D, Whiteway MR, Hurwitz C, Greenspan N, Lee RS, Vishnubhotla A, Warren R, Pedraja F, Noone D, Schartner M, Huntenburg JM, Khanal A, Meijer GT, Noel JP, Pan-Vazquez A, Socha KZ, Urai AE; International Brain Laboratory; Cunningham JP, Sawtell NB, Paninski L. Biderman D, et al. Among authors: huntenburg jm. bioRxiv [Preprint]. 2024 Apr 3:2023.04.28.538703. doi: 10.1101/2023.04.28.538703. bioRxiv. 2024. Update in: Nat Methods. 2024 Jul;21(7):1316-1328. doi: 10.1038/s41592-024-02319-1. PMID: 37162966 Free PMC article. Updated. Preprint.
A modular architecture for organizing, processing and sharing neurophysiology data.
International Brain Laboratory; Bonacchi N, Chapuis GA, Churchland AK, DeWitt EEJ, Faulkner M, Harris KD, Huntenburg JM, Hunter M, Laranjeira IC, Rossant C, Sasaki M, Schartner MM, Shen S, Steinmetz NA, Walker EY, West SJ, Winter O, Wells MJ. International Brain Laboratory, et al. Among authors: huntenburg jm. Nat Methods. 2023 Mar;20(3):403-407. doi: 10.1038/s41592-022-01742-6. Epub 2023 Mar 2. Nat Methods. 2023. PMID: 36864199 Free PMC article.
Motor sequences; separating the sequence from the motor. A longitudinal rsfMRI study.
Jäger AP, Huntenburg JM, Tremblay SA, Schneider U, Grahl S, Huck J, Tardif CL, Villringer A, Gauthier CJ, Bazin PL, Steele CJ. Jäger AP, et al. Among authors: huntenburg jm. Brain Struct Funct. 2022 Apr;227(3):793-807. doi: 10.1007/s00429-021-02412-7. Epub 2021 Oct 27. Brain Struct Funct. 2022. PMID: 34704176 Free PMC article.
Effects of Mindfulness Training on Emotion Regulation in Patients With Depression: Reduced Dorsolateral Prefrontal Cortex Activation Indexes Early Beneficial Changes.
Barnhofer T, Reess TJ, Fissler M, Winnebeck E, Grimm S, Gärtner M, Fan Y, Huntenburg JM, Schroeter TA, Gummersbach M, Bajbouj M, Hölzel BK. Barnhofer T, et al. Among authors: huntenburg jm. Psychosom Med. 2021 Jul-Aug 01;83(6):579-591. doi: 10.1097/PSY.0000000000000955. Psychosom Med. 2021. PMID: 34213860 Clinical Trial.
Brainhack: Developing a culture of open, inclusive, community-driven neuroscience.
Gau R, Noble S, Heuer K, Bottenhorn KL, Bilgin IP, Yang YF, Huntenburg JM, Bayer JMM, Bethlehem RAI, Rhoads SA, Vogelbacher C, Borghesani V, Levitis E, Wang HT, Van Den Bossche S, Kobeleva X, Legarreta JH, Guay S, Atay SM, Varoquaux GP, Huijser DC, Sandström MS, Herholz P, Nastase SA, Badhwar A, Dumas G, Schwab S, Moia S, Dayan M, Bassil Y, Brooks PP, Mancini M, Shine JM, O'Connor D, Xie X, Poggiali D, Friedrich P, Heinsfeld AS, Riedl L, Toro R, Caballero-Gaudes C, Eklund A, Garner KG, Nolan CR, Demeter DV, Barrios FA, Merchant JS, McDevitt EA, Oostenveld R, Craddock RC, Rokem A, Doyle A, Ghosh SS, Nikolaidis A, Stanley OW, Uruñuela E; Brainhack Community. Gau R, et al. Among authors: huntenburg jm. Neuron. 2021 Jun 2;109(11):1769-1775. doi: 10.1016/j.neuron.2021.04.001. Epub 2021 Apr 30. Neuron. 2021. PMID: 33932337 Free PMC article.
Mindfulness-Based Therapy Regulates Brain Connectivity in Major Depression.
Lifshitz M, Sacchet MD, Huntenburg JM, Thiery T, Fan Y, Gärtner M, Grimm S, Winnebeck E, Fissler M, Schroeter TA, Margulies DS, Barnhofer T. Lifshitz M, et al. Among authors: huntenburg jm. Psychother Psychosom. 2019;88(6):375-377. doi: 10.1159/000501170. Epub 2019 Sep 11. Psychother Psychosom. 2019. PMID: 31509824 Clinical Trial. No abstract available.
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