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The Monarch Initiative in 2024: an analytic platform integrating phenotypes, genes and diseases across species.
Nucleic Acids Res. 2024 Jan 5;52(D1):D938-D949. doi: 10.1093/nar/gkad1082.
Nucleic Acids Res. 2024.
PMID: 38000386
Free PMC article.
KG-Hub-building and exchanging biological knowledge graphs.
Caufield JH, Putman T, Schaper K, Unni DR, Hegde H, Callahan TJ, Cappelletti L, Moxon SAT, Ravanmehr V, Carbon S, Chan LE, Cortes K, Shefchek KA, Elsarboukh G, Balhoff J, Fontana T, Matentzoglu N, Bruskiewich RM, Thessen AE, Harris NL, Munoz-Torres MC, Haendel MA, Robinson PN, Joachimiak MP, Mungall CJ, Reese JT.
Caufield JH, et al.
Bioinformatics. 2023 Jul 1;39(7):btad418. doi: 10.1093/bioinformatics/btad418.
Bioinformatics. 2023.
PMID: 37389415
Free PMC article.
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Towards a standard benchmark for variant and gene prioritisation algorithms: PhEval - Phenotypic inference Evaluation framework.
Bridges Y, de Souza V, Cortes KG, Haendel M, Harris NL, Korn DR, Marinakis NM, Matentzoglu N, McLaughlin JA, Mungall CJ, Osumi-Sutherland D, Robinson PN, Smedley D, Jacobsen JO.
Bridges Y, et al. Among authors: cortes kg.
bioRxiv [Preprint]. 2024 Jun 16:2024.06.13.598672. doi: 10.1101/2024.06.13.598672.
bioRxiv. 2024.
PMID: 38915571
Free PMC article.
Preprint.
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Neural network dose prediction for cervical brachytherapy: Overcoming data scarcity for applicator-specific models.
Moore LC, Ahern F, Li L, Kallis K, Kisling K, Cortes KG, Nwachukwu C, Rash D, Yashar CM, Mayadev J, Zou J, Vasconcelos N, Meyers SM.
Moore LC, et al. Among authors: cortes kg.
Med Phys. 2024 Jul;51(7):4591-4606. doi: 10.1002/mp.17230. Epub 2024 May 30.
Med Phys. 2024.
PMID: 38814165
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Automated treatment planning framework for brachytherapy of cervical cancer using 3D dose predictions.
Kallis K, Moore LC, Cortes KG, Brown D, Mayadev J, Moore KL, Meyers SM.
Kallis K, et al. Among authors: cortes kg.
Phys Med Biol. 2023 Apr 5;68(8):10.1088/1361-6560/acc37c. doi: 10.1088/1361-6560/acc37c.
Phys Med Biol. 2023.
PMID: 36898161
Free PMC article.
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Knowledge-based three-dimensional dose prediction for tandem-and-ovoid brachytherapy.
Cortes KG, Kallis K, Simon A, Mayadev J, Meyers SM, Moore KL.
Cortes KG, et al.
Brachytherapy. 2022 Jul-Aug;21(4):532-542. doi: 10.1016/j.brachy.2022.03.002. Epub 2022 May 11.
Brachytherapy. 2022.
PMID: 35562285
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