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Mutation order in acute myeloid leukemia identifies uncommon patterns of evolution and illuminates phenotypic heterogeneity.
Schwede M, Jahn K, Kuipers J, Miles LA, Bowman RL, Robinson T, Furudate K, Uryu H, Tanaka T, Sasaki Y, Ediriwickrema A, Benard B, Gentles AJ, Levine R, Beerenwinkel N, Takahashi K, Majeti R. Schwede M, et al. Among authors: kuipers j. Res Sq [Preprint]. 2023 Nov 6:rs.3.rs-3516536. doi: 10.21203/rs.3.rs-3516536/v1. Res Sq. 2023. Update in: Leukemia. 2024 Jul;38(7):1501-1510. doi: 10.1038/s41375-024-02211-z PMID: 37986825 Free PMC article. Updated. Preprint.
Tree inference for single-cell data.
Jahn K, Kuipers J, Beerenwinkel N. Jahn K, et al. Among authors: kuipers j. Genome Biol. 2016 May 5;17:86. doi: 10.1186/s13059-016-0936-x. Genome Biol. 2016. PMID: 27149953 Free PMC article.
Large-scale inference of conjunctive Bayesian networks.
Montazeri H, Kuipers J, Kouyos R, Böni J, Yerly S, Klimkait T, Aubert V, Günthard HF, Beerenwinkel N; Swiss HIV Cohort Study. Montazeri H, et al. Among authors: kuipers j. Bioinformatics. 2016 Sep 1;32(17):i727-i735. doi: 10.1093/bioinformatics/btw459. Bioinformatics. 2016. PMID: 27587695
Mutational interactions define novel cancer subgroups.
Kuipers J, Thurnherr T, Moffa G, Suter P, Behr J, Goosen R, Christofori G, Beerenwinkel N. Kuipers J, et al. Nat Commun. 2018 Oct 19;9(1):4353. doi: 10.1038/s41467-018-06867-x. Nat Commun. 2018. PMID: 30341300 Free PMC article.
353 results