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SPIRE: a Searchable, Planetary-scale mIcrobiome REsource.
Schmidt TSB, Fullam A, Ferretti P, Orakov A, Maistrenko OM, Ruscheweyh HJ, Letunic I, Duan Y, Van Rossum T, Sunagawa S, Mende DR, Finn RD, Kuhn M, Pedro Coelho L, Bork P. Schmidt TSB, et al. Among authors: bork p. Nucleic Acids Res. 2024 Jan 5;52(D1):D777-D783. doi: 10.1093/nar/gkad943. Nucleic Acids Res. 2024. PMID: 37897342 Free PMC article.
Recent improvements to the SMART domain-based sequence annotation resource.
Letunic I, Goodstadt L, Dickens NJ, Doerks T, Schultz J, Mott R, Ciccarelli F, Copley RR, Ponting CP, Bork P. Letunic I, et al. Among authors: bork p. Nucleic Acids Res. 2002 Jan 1;30(1):242-4. doi: 10.1093/nar/30.1.242. Nucleic Acids Res. 2002. PMID: 11752305 Free PMC article.
Genome and protein evolution in eukaryotes.
Copley RR, Letunic I, Bork P. Copley RR, et al. Among authors: bork p. Curr Opin Chem Biol. 2002 Feb;6(1):39-45. doi: 10.1016/s1367-5931(01)00278-2. Curr Opin Chem Biol. 2002. PMID: 11827821 Review.
Protein domain analysis in the era of complete genomes.
Copley RR, Doerks T, Letunic I, Bork P. Copley RR, et al. Among authors: bork p. FEBS Lett. 2002 Feb 20;513(1):129-34. doi: 10.1016/s0014-5793(01)03289-6. FEBS Lett. 2002. PMID: 11911892 Free article. Review.
The InterPro Database, 2003 brings increased coverage and new features.
Mulder NJ, Apweiler R, Attwood TK, Bairoch A, Barrell D, Bateman A, Binns D, Biswas M, Bradley P, Bork P, Bucher P, Copley RR, Courcelle E, Das U, Durbin R, Falquet L, Fleischmann W, Griffiths-Jones S, Haft D, Harte N, Hulo N, Kahn D, Kanapin A, Krestyaninova M, Lopez R, Letunic I, Lonsdale D, Silventoinen V, Orchard SE, Pagni M, Peyruc D, Ponting CP, Selengut JD, Servant F, Sigrist CJ, Vaughan R, Zdobnov EM. Mulder NJ, et al. Among authors: bork p. Nucleic Acids Res. 2003 Jan 1;31(1):315-8. doi: 10.1093/nar/gkg046. Nucleic Acids Res. 2003. PMID: 12520011 Free PMC article.
ELM server: A new resource for investigating short functional sites in modular eukaryotic proteins.
Puntervoll P, Linding R, Gemünd C, Chabanis-Davidson S, Mattingsdal M, Cameron S, Martin DM, Ausiello G, Brannetti B, Costantini A, Ferrè F, Maselli V, Via A, Cesareni G, Diella F, Superti-Furga G, Wyrwicz L, Ramu C, McGuigan C, Gudavalli R, Letunic I, Bork P, Rychlewski L, Küster B, Helmer-Citterich M, Hunter WN, Aasland R, Gibson TJ. Puntervoll P, et al. Among authors: bork p. Nucleic Acids Res. 2003 Jul 1;31(13):3625-30. doi: 10.1093/nar/gkg545. Nucleic Acids Res. 2003. PMID: 12824381 Free PMC article.
Alternative splicing and evolution.
Boue S, Letunic I, Bork P. Boue S, et al. Among authors: bork p. Bioessays. 2003 Nov;25(11):1031-4. doi: 10.1002/bies.10371. Bioessays. 2003. PMID: 14579243 Review.
SMART 4.0: towards genomic data integration.
Letunic I, Copley RR, Schmidt S, Ciccarelli FD, Doerks T, Schultz J, Ponting CP, Bork P. Letunic I, et al. Among authors: bork p. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D142-4. doi: 10.1093/nar/gkh088. Nucleic Acids Res. 2004. PMID: 14681379 Free PMC article.
704 results