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An ANXA11 P93S variant dysregulates TDP-43 and causes corticobasal syndrome.
Snyder A, Ryan VH, Hawrot J, Lawton S, Ramos DM, Qi YA, Johnson K, Reed X, Johnson NL, Kollasch AW, Duffy M, VandeVrede L, Cochran JN, Miller BL, Toro C, Bielekova B, Yokoyama JS, Marks DS, Kwan JY, Cookson MR, Ward ME. Snyder A, et al. Among authors: ramos dm. Res Sq [Preprint]. 2023 Oct 19:rs.3.rs-3462973. doi: 10.21203/rs.3.rs-3462973/v1. Res Sq. 2023. Update in: Alzheimers Dement. 2024 Aug;20(8):5220-5235. doi: 10.1002/alz.13915. PMID: 37886540 Free PMC article. Updated. Preprint.
Mis-spliced transcripts generate de novo proteins in TDP-43-related ALS/FTD.
Seddighi S, Qi YA, Brown AL, Wilkins OG, Bereda C, Belair C, Zhang Y, Prudencio M, Keuss MJ, Khandeshi A, Pickles S, Hill SE, Hawrot J, Ramos DM, Yuan H, Roberts J, Kelmer Sacramento E, Shah SI, Nalls MA, Colon-Mercado J, Reyes JF, Ryan VH, Nelson MP, Cook C, Li Z, Screven L, Kwan JY, Shantaraman A, Ping L, Koike Y, Oskarsson B, Staff N, Duong DM, Ahmed A, Secrier M, Ule J, Jacobson S, Rohrer J, Malaspina A, Glass JD, Ori A, Seyfried NT, Maragkakis M, Petrucelli L, Fratta P, Ward ME. Seddighi S, et al. Among authors: ramos dm. bioRxiv [Preprint]. 2023 Jan 23:2023.01.23.525149. doi: 10.1101/2023.01.23.525149. bioRxiv. 2023. Update in: Sci Transl Med. 2024 Feb 14;16(734):eadg7162. doi: 10.1126/scitranslmed.adg7162. PMID: 36747793 Free PMC article. Updated. Preprint.
Application of Aligned-UMAP to longitudinal biomedical studies.
Dadu A, Satone VK, Kaur R, Koretsky MJ, Iwaki H, Qi YA, Ramos DM, Avants B, Hesterman J, Gunn R, Cookson MR, Ward ME, Singleton AB, Campbell RH, Nalls MA, Faghri F. Dadu A, et al. Among authors: ramos dm. Patterns (N Y). 2023 May 8;4(6):100741. doi: 10.1016/j.patter.2023.100741. eCollection 2023 Jun 9. Patterns (N Y). 2023. PMID: 37409055 Free PMC article.
A fully automated FAIMS-DIA mass spectrometry-based proteomic pipeline.
Reilly L, Lara E, Ramos D, Li Z, Pantazis CB, Stadler J, Santiana M, Roberts J, Faghri F, Hao Y, Nalls MA, Narayan P, Liu Y, Singleton AB, Cookson MR, Ward ME, Qi YA. Reilly L, et al. Cell Rep Methods. 2023 Oct 23;3(10):100593. doi: 10.1016/j.crmeth.2023.100593. Epub 2023 Sep 19. Cell Rep Methods. 2023. PMID: 37729920 Free PMC article.
Author Correction: TDP-43 loss and ALS-risk SNPs drive mis-splicing and depletion of UNC13A.
Brown AL, Wilkins OG, Keuss MJ, Hill SE, Zanovello M, Lee WC, Bampton A, Lee FCY, Masino L, Qi YA, Bryce-Smith S, Gatt A, Hallegger M, Fagegaltier D, Phatnani H; NYGC ALS Consortium; Newcombe J, Gustavsson EK, Seddighi S, Reyes JF, Coon SL, Ramos D, Schiavo G, Fisher EMC, Raj T, Secrier M, Lashley T, Ule J, Buratti E, Humphrey J, Ward ME, Fratta P. Brown AL, et al. Nature. 2024 Jul;631(8020):E7. doi: 10.1038/s41586-024-07577-9. Nature. 2024. PMID: 38890465 Free PMC article. No abstract available.
An ANXA11 P93S variant dysregulates TDP-43 and causes corticobasal syndrome.
Snyder A, Ryan VH, Hawrot J, Lawton S, Ramos DM, Qi YA, Johnson KR, Reed X, Johnson NL, Kollasch AW, Duffy MF, VandeVrede L, Cochran JN, Miller BL, Toro C, Bielekova B, Marks DS, Yokoyama JS, Kwan JY, Cookson MR, Ward ME. Snyder A, et al. Among authors: ramos dm. Alzheimers Dement. 2024 Aug;20(8):5220-5235. doi: 10.1002/alz.13915. Epub 2024 Jun 26. Alzheimers Dement. 2024. PMID: 38923692 Free PMC article.
Camera trap surveys of Atlantic Forest mammals: A data set for analyses considering imperfect detection (2004-2020).
Franceschi IC, Dornas RADP, Lermen IS, Coelho AVP, Vilas Boas AH, Chiarello AG, Paglia AP, de Souza AC, Borsekowsky AR, Rocha A, Bager A, de Souza AZ, Lopes AMC, de Moura AS, Ferreira AS, García-Olaechea A, Delciellos AC, Bacellar AEF, Campelo AKN, Paschoal AMO, Rolim AC, da Silva ALF, Lanna AM, da Silva AP, Guimarães A, Cardoso Â, Cassol AS, da Costa-Pinto AL, do Nascimento AGS, Fernandes AS, Clyvia A, Santos ABD, Lima-Silva B, Beisiegel BM, Luciano BFL, Leopoldo BF, Krobel BN, Kubiak BB, Saranholi BH, Correa BS, Sant Anna Teixeira C, Ayroza CR, Cassano CR, Benitez-Riveros C, Gestich CC, Tedesco CD, Gheler-Costa C, Hegel CGZ, Evangelista Junior CDS, Ferreira CEMF, Grelle CEV, Esteves CF, Espinosa CDC, Leuchtenberger C, Sanchéz-Lalinde C, Machado CIC, Andreazzi C, Bueno C, Cronemberger de Faria C, Novaes C, Widmer CE, Santos CC, Ferraz DDS, Galiano D, Bôlla DAS, Behs D, Rodrigues DP, de Melo DP, Ramos DMS, de Mattia DL, Pavei DD, Loretto D, Huning DDS, Dias DM, Paetzhold ÉR, Rios E, Setz EZF, Cazetta E, Cafofo Silva EG, Pasa E, Saito EN, de Aguiar EFS, Castro ÉP, Viveiros de Castro EB, Pedó E, Pereira FA, Bolzan F, Roque FO, Mazim FD, Comin FH, Maffei F, Peters FB, Fantacin… See abstract for full author list ➔ Franceschi IC, et al. Among authors: ramos dms. Ecology. 2024 May;105(5):e4298. doi: 10.1002/ecy.4298. Epub 2024 Apr 12. Ecology. 2024. PMID: 38610092
Mis-spliced transcripts generate de novo proteins in TDP-43-related ALS/FTD.
Seddighi S, Qi YA, Brown AL, Wilkins OG, Bereda C, Belair C, Zhang YJ, Prudencio M, Keuss MJ, Khandeshi A, Pickles S, Kargbo-Hill SE, Hawrot J, Ramos DM, Yuan H, Roberts J, Sacramento EK, Shah SI, Nalls MA, Colón-Mercado JM, Reyes JF, Ryan VH, Nelson MP, Cook CN, Li Z, Screven L, Kwan JY, Mehta PR, Zanovello M, Hallegger M, Shantaraman A, Ping L, Koike Y, Oskarsson B, Staff NP, Duong DM, Ahmed A, Secrier M, Ule J, Jacobson S, Reich DS, Rohrer JD, Malaspina A, Dickson DW, Glass JD, Ori A, Seyfried NT, Maragkakis M, Petrucelli L, Fratta P, Ward ME. Seddighi S, et al. Among authors: ramos dm. Sci Transl Med. 2024 Feb 14;16(734):eadg7162. doi: 10.1126/scitranslmed.adg7162. Epub 2024 Feb 14. Sci Transl Med. 2024. PMID: 38277467 Free PMC article.
100 results