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Network-based elucidation of colon cancer drug resistance by phosphoproteomic time-series analysis.
Rosenberger G, Li W, Turunen M, He J, Subramaniam PS, Pampou S, Griffin AT, Karan C, Kerwin P, Murray D, Honig B, Liu Y, Califano A. Rosenberger G, et al. Among authors: karan c. bioRxiv [Preprint]. 2023 Feb 16:2023.02.15.528736. doi: 10.1101/2023.02.15.528736. bioRxiv. 2023. Update in: Nat Commun. 2024 May 9;15(1):3909. doi: 10.1038/s41467-024-47957-3. PMID: 36824919 Free PMC article. Updated. Preprint.
A community computational challenge to predict the activity of pairs of compounds.
Bansal M, Yang J, Karan C, Menden MP, Costello JC, Tang H, Xiao G, Li Y, Allen J, Zhong R, Chen B, Kim M, Wang T, Heiser LM, Realubit R, Mattioli M, Alvarez MJ, Shen Y; NCI-DREAM Community; Gallahan D, Singer D, Saez-Rodriguez J, Xie Y, Stolovitzky G, Califano A; NCI-DREAM Community. Bansal M, et al. Among authors: karan c. Nat Biotechnol. 2014 Dec;32(12):1213-22. doi: 10.1038/nbt.3052. Epub 2014 Nov 17. Nat Biotechnol. 2014. PMID: 25419740 Free PMC article.
A cell state specific metabolic vulnerability to GPX4-dependent ferroptosis in glioblastoma.
Banu MA, Dovas A, Argenziano MG, Zhao W, Grajal HC, Higgins DMO, Sperring CP, Pereira B, Ye LF, Mahajan A, Humala N, Furnari JL, Upadhyayula PS, Zandkarimi F, Nguyen TTT, Wu PB, Hai L, Karan C, Razavilar A, Siegelin MD, Kitajewski J, Bruce JN, Stockwell BR, Sims PA, Canoll PD. Banu MA, et al. Among authors: karan c. bioRxiv [Preprint]. 2023 Feb 23:2023.02.22.529581. doi: 10.1101/2023.02.22.529581. bioRxiv. 2023. Update in: EMBO J. 2024 Aug 27. doi: 10.1038/s44318-024-00176-4. PMID: 36865302 Free PMC article. Updated. Preprint.
A cell state-specific metabolic vulnerability to GPX4-dependent ferroptosis in glioblastoma.
Banu MA, Dovas A, Argenziano MG, Zhao W, Sperring CP, Cuervo Grajal H, Liu Z, Higgins DM, Amini M, Pereira B, Ye LF, Mahajan A, Humala N, Furnari JL, Upadhyayula PS, Zandkarimi F, Nguyen TT, Teasley D, Wu PB, Hai L, Karan C, Dowdy T, Razavilar A, Siegelin MD, Kitajewski J, Larion M, Bruce JN, Stockwell BR, Sims PA, Canoll P. Banu MA, et al. Among authors: karan c. EMBO J. 2024 Aug 27. doi: 10.1038/s44318-024-00176-4. Online ahead of print. EMBO J. 2024. PMID: 39192032 Free article.
Multiwell-based G0-PCC assay for radiation biodosimetry.
Royba E, Shuryak I, Ponnaiya B, Repin M, Pampou S, Karan C, Turner H, Garty G, Brenner DJ. Royba E, et al. Among authors: karan c. Sci Rep. 2024 Aug 26;14(1):19789. doi: 10.1038/s41598-024-69243-4. Sci Rep. 2024. PMID: 39187542 Free PMC article.
Molsidomine provides neuroprotection against vincristine-induced peripheral neurotoxicity through soluble guanylyl cyclase activation.
Utkina-Sosunova I, Chiorazzi A, de Planell-Saguer M, Li H, Meregalli C, Pozzi E, Carozzi VA, Canta A, Monza L, Alberti P, Fumagalli G, Karan C, Moayedi Y, Przedborski S, Cavaletti G, Lotti F. Utkina-Sosunova I, et al. Among authors: karan c. Sci Rep. 2024 Aug 20;14(1):19341. doi: 10.1038/s41598-024-70294-w. Sci Rep. 2024. PMID: 39164364 Free PMC article.
60 results