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Expanding the stdpopsim species catalog, and lessons learned for realistic genome simulations.
Lauterbur ME, Cavassim MIA, Gladstein AL, Gower G, Pope NS, Tsambos G, Adrion J, Belsare S, Biddanda A, Caudill V, Cury J, Echevarria I, Haller BC, Hasan AR, Huang X, Iasi LNM, Noskova E, Obsteter J, Pavinato VAC, Pearson A, Peede D, Perez MF, Rodrigues MF, Smith CCR, Spence JP, Teterina A, Tittes S, Unneberg P, Vazquez JM, Waples RK, Wohns AW, Wong Y, Baumdicker F, Cartwright RA, Gorjanc G, Gutenkunst RN, Kelleher J, Kern AD, Ragsdale AP, Ralph PL, Schrider DR, Gronau I. Lauterbur ME, et al. Among authors: gorjanc g. Elife. 2023 Jun 21;12:RP84874. doi: 10.7554/eLife.84874. Elife. 2023. PMID: 37342968 Free PMC article.
AlphaMPSim: flexible simulation of multi-parent crosses.
Hickey JM, Gorjanc G, Hearne S, Huang BE. Hickey JM, et al. Among authors: gorjanc g. Bioinformatics. 2014 Sep 15;30(18):2686-8. doi: 10.1093/bioinformatics/btu206. Epub 2014 May 28. Bioinformatics. 2014. PMID: 24872425
Genomic evaluations using similarity between haplotypes.
Hickey JM, Kinghorn BP, Tier B, Clark SA, van der Werf JH, Gorjanc G. Hickey JM, et al. Among authors: gorjanc g. J Anim Breed Genet. 2013 Aug;130(4):259-69. doi: 10.1111/jbg.12020. Epub 2012 Dec 29. J Anim Breed Genet. 2013. PMID: 23855628
103 results