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Genome-wide CRISPR/Cas9 screen shows that loss of GET4 increases mitochondria-endoplasmic reticulum contact sites and is neuroprotective.
Wilson EL, Yu Y, Leal NS, Woodward JA, Patikas N, Morris JL, Field SF, Plumbly W, Paupe V, Chowdhury SR, Antrobus R, Lindop GE, Adia YM, Loh SHY, Prudent J, Martins LM, Metzakopian E. Wilson EL, et al. Among authors: patikas n. Cell Death Dis. 2024 Mar 11;15(3):203. doi: 10.1038/s41419-024-06568-y. Cell Death Dis. 2024. PMID: 38467609 Free PMC article.
OpenMS 3 enables reproducible analysis of large-scale mass spectrometry data.
Pfeuffer J, Bielow C, Wein S, Jeong K, Netz E, Walter A, Alka O, Nilse L, Colaianni PD, McCloskey D, Kim J, Rosenberger G, Bichmann L, Walzer M, Veit J, Boudaud B, Bernt M, Patikas N, Pilz M, Startek MP, Kutuzova S, Heumos L, Charkow J, Sing JC, Feroz A, Siraj A, Weisser H, Dijkstra TMH, Perez-Riverol Y, Röst H, Kohlbacher O, Sachsenberg T. Pfeuffer J, et al. Among authors: patikas n. Nat Methods. 2024 Mar;21(3):365-367. doi: 10.1038/s41592-024-02197-7. Nat Methods. 2024. PMID: 38366242 No abstract available.
Production of human entorhinal stellate cell-like cells by forward programming shows an important role of Foxp1 in reprogramming.
Bergmann T, Liu Y, Skov J, Mogus L, Lee J, Pfisterer U, Handfield LF, Asenjo-Martinez A, Lisa-Vargas I, Seemann SE, Lee JTH, Patikas N, Kornum BR, Denham M, Hyttel P, Witter MP, Gorodkin J, Pers TH, Hemberg M, Khodosevich K, Hall VJ. Bergmann T, et al. Among authors: patikas n. Front Cell Dev Biol. 2022 Aug 15;10:976549. doi: 10.3389/fcell.2022.976549. eCollection 2022. Front Cell Dev Biol. 2022. PMID: 36046338 Free PMC article.
The transcription factor BCL11A defines distinct subsets of midbrain dopaminergic neurons.
Tolve M, Ulusoy A, Patikas N, Islam KUS, Bodea GO, Öztürk E, Broske B, Mentani A, Wagener A, van Loo KMJ, Britsch S, Liu P, Khaled WT, Metzakopian E, Baader SL, Di Monte DA, Blaess S. Tolve M, et al. Among authors: patikas n. Cell Rep. 2021 Sep 14;36(11):109697. doi: 10.1016/j.celrep.2021.109697. Cell Rep. 2021. PMID: 34525371 Free article.