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Page 1
FAIR in action - a flexible framework to guide FAIRification.
Welter D, Juty N, Rocca-Serra P, Xu F, Henderson D, Gu W, Strubel J, Giessmann RT, Emam I, Gadiya Y, Abbassi-Daloii T, Alharbi E, Gray AJG, Courtot M, Gribbon P, Ioannidis V, Reilly DS, Lynch N, Boiten JW, Satagopam V, Goble C, Sansone SA, Burdett T. Welter D, et al. Among authors: courtot m. Sci Data. 2023 May 19;10(1):291. doi: 10.1038/s41597-023-02167-2. Sci Data. 2023. PMID: 37208349 Free PMC article.
CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database.
Jia B, Raphenya AR, Alcock B, Waglechner N, Guo P, Tsang KK, Lago BA, Dave BM, Pereira S, Sharma AN, Doshi S, Courtot M, Lo R, Williams LE, Frye JG, Elsayegh T, Sardar D, Westman EL, Pawlowski AC, Johnson TA, Brinkman FS, Wright GD, McArthur AG. Jia B, et al. Among authors: courtot m. Nucleic Acids Res. 2017 Jan 4;45(D1):D566-D573. doi: 10.1093/nar/gkw1004. Epub 2016 Oct 26. Nucleic Acids Res. 2017. PMID: 27789705 Free PMC article.
Prospects for Fungal Bioremediation of Acidic Radioactive Waste Sites: Characterization and Genome Sequence of Rhodotorula taiwanensis MD1149.
Tkavc R, Matrosova VY, Grichenko OE, Gostinčar C, Volpe RP, Klimenkova P, Gaidamakova EK, Zhou CE, Stewart BJ, Lyman MG, Malfatti SA, Rubinfeld B, Courtot M, Singh J, Dalgard CL, Hamilton T, Frey KG, Gunde-Cimerman N, Dugan L, Daly MJ. Tkavc R, et al. Among authors: courtot m. Front Microbiol. 2018 Jan 8;8:2528. doi: 10.3389/fmicb.2017.02528. eCollection 2017. Front Microbiol. 2018. PMID: 29375494 Free PMC article.
OntoFox: web-based support for ontology reuse.
Xiang Z, Courtot M, Brinkman RR, Ruttenberg A, He Y. Xiang Z, et al. Among authors: courtot m. BMC Res Notes. 2010 Jun 22;3:175. doi: 10.1186/1756-0500-3-175. BMC Res Notes. 2010. PMID: 20569493 Free PMC article.
flowCL: ontology-based cell population labelling in flow cytometry.
Courtot M, Meskas J, Diehl AD, Droumeva R, Gottardo R, Jalali A, Taghiyar MJ, Maecker HT, McCoy JP, Ruttenberg A, Scheuermann RH, Brinkman RR. Courtot M, et al. Bioinformatics. 2015 Apr 15;31(8):1337-9. doi: 10.1093/bioinformatics/btu807. Epub 2014 Dec 6. Bioinformatics. 2015. PMID: 25481008 Free PMC article.
Identifiers for the 21st century: How to design, provision, and reuse persistent identifiers to maximize utility and impact of life science data.
McMurry JA, Juty N, Blomberg N, Burdett T, Conlin T, Conte N, Courtot M, Deck J, Dumontier M, Fellows DK, Gonzalez-Beltran A, Gormanns P, Grethe J, Hastings J, Hériché JK, Hermjakob H, Ison JC, Jimenez RC, Jupp S, Kunze J, Laibe C, Le Novère N, Malone J, Martin MJ, McEntyre JR, Morris C, Muilu J, Müller W, Rocca-Serra P, Sansone SA, Sariyar M, Snoep JL, Soiland-Reyes S, Stanford NJ, Swainston N, Washington N, Williams AR, Wimalaratne SM, Winfree LM, Wolstencroft K, Goble C, Mungall CJ, Haendel MA, Parkinson H. McMurry JA, et al. Among authors: courtot m. PLoS Biol. 2017 Jun 29;15(6):e2001414. doi: 10.1371/journal.pbio.2001414. eCollection 2017 Jun. PLoS Biol. 2017. PMID: 28662064 Free PMC article.
BioSamples database: an updated sample metadata hub.
Courtot M, Cherubin L, Faulconbridge A, Vaughan D, Green M, Richardson D, Harrison P, Whetzel PL, Parkinson H, Burdett T. Courtot M, et al. Nucleic Acids Res. 2019 Jan 8;47(D1):D1172-D1178. doi: 10.1093/nar/gky1061. Nucleic Acids Res. 2019. PMID: 30407529 Free PMC article.
ELIXIR biovalidator for semantic validation of life science metadata.
Liyanage I, Burdett T, Droesbeke B, Erdos K, Fernandez R, Gray A, Haseeb M, Jupp S, Penim F, Pommier C, Rocca-Serra P, Courtot M, Coppens F. Liyanage I, et al. Among authors: courtot m. Bioinformatics. 2022 May 26;38(11):3141-3142. doi: 10.1093/bioinformatics/btac195. Bioinformatics. 2022. PMID: 35380605 Free PMC article.
The FAIR Cookbook - the essential resource for and by FAIR doers.
Rocca-Serra P, Gu W, Ioannidis V, Abbassi-Daloii T, Capella-Gutierrez S, Chandramouliswaran I, Splendiani A, Burdett T, Giessmann RT, Henderson D, Batista D, Emam I, Gadiya Y, Giovanni L, Willighagen E, Evelo C, Gray AJG, Gribbon P, Juty N, Welter D, Quast K, Peeters P, Plasterer T, Wood C, van der Horst E, Reilly D, van Vlijmen H, Scollen S, Lister A, Thurston M, Granell R; FAIR Cookbook Contributors; Sansone SA. Rocca-Serra P, et al. Sci Data. 2023 May 19;10(1):292. doi: 10.1038/s41597-023-02166-3. Sci Data. 2023. PMID: 37208467 Free PMC article.
39 results