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Hybrids of RNA viruses and viroid-like elements replicate in fungi.
Forgia M, Navarro B, Daghino S, Cervera A, Gisel A, Perotto S, Aghayeva DN, Akinyuwa MF, Gobbi E, Zheludev IN, Edgar RC, Chikhi R, Turina M, Babaian A, Di Serio F, de la Peña M. Forgia M, et al. Among authors: zheludev in. Nat Commun. 2023 May 5;14(1):2591. doi: 10.1038/s41467-023-38301-2. Nat Commun. 2023. PMID: 37147358 Free PMC article.
Accelerated cryo-EM-guided determination of three-dimensional RNA-only structures.
Kappel K, Zhang K, Su Z, Watkins AM, Kladwang W, Li S, Pintilie G, Topkar VV, Rangan R, Zheludev IN, Yesselman JD, Chiu W, Das R. Kappel K, et al. Among authors: zheludev in. Nat Methods. 2020 Jul;17(7):699-707. doi: 10.1038/s41592-020-0878-9. Epub 2020 Jul 2. Nat Methods. 2020. PMID: 32616928 Free PMC article.
Cryo-EM and antisense targeting of the 28-kDa frameshift stimulation element from the SARS-CoV-2 RNA genome.
Zhang K, Zheludev IN, Hagey RJ, Haslecker R, Hou YJ, Kretsch R, Pintilie GD, Rangan R, Kladwang W, Li S, Wu MT, Pham EA, Bernardin-Souibgui C, Baric RS, Sheahan TP, D'Souza V, Glenn JS, Chiu W, Das R. Zhang K, et al. Among authors: zheludev in. Nat Struct Mol Biol. 2021 Sep;28(9):747-754. doi: 10.1038/s41594-021-00653-y. Epub 2021 Aug 23. Nat Struct Mol Biol. 2021. PMID: 34426697 Free PMC article.
RNA target highlights in CASP15: Evaluation of predicted models by structure providers.
Kretsch RC, Andersen ES, Bujnicki JM, Chiu W, Das R, Luo B, Masquida B, McRae EKS, Schroeder GM, Su Z, Wedekind JE, Xu L, Zhang K, Zheludev IN, Moult J, Kryshtafovych A. Kretsch RC, et al. Among authors: zheludev in. Proteins. 2023 Dec;91(12):1600-1615. doi: 10.1002/prot.26550. Epub 2023 Jul 19. Proteins. 2023. PMID: 37466021 Free PMC article.
Viroid-like colonists of human microbiomes.
Zheludev IN, Edgar RC, Lopez-Galiano MJ, de la Peña M, Babaian A, Bhatt AS, Fire AZ. Zheludev IN, et al. Cell. 2024 Oct 23:S0092-8674(24)01091-2. doi: 10.1016/j.cell.2024.09.033. Online ahead of print. Cell. 2024. PMID: 39481381
18 results