Singh S - Search Results

1

nELISA: A high-throughput, high-plex platform enables quantitative profiling of the secretome.

Dagher M, Ongo G, Robichaud N, Kong J, Rho W, Teahulos I, Tavakoli A, Bovaird S, Merjaneh S, Tan A, Edwardson K, Scheepers C, Ng A, Hajjar A, Sow B, Vrouvides M, Lee A, DeCorwin-Martin P, Rasool S, Huang J, Han Y, Erps T, Coffin S, Chandrasekaran SN, Miller L, Kost-Alimova M, Skepner A, Singh S, Carpenter AE, Munzar J, Juncker D. Dagher M, et al. Among authors: singh s. bioRxiv [Preprint]. 2023 Jun 28:2023.04.17.535914. doi: 10.1101/2023.04.17.535914. bioRxiv. 2023. PMID: 37131604 Free PMC article. Preprint.

2

Increasing the Content of High-Content Screening: An Overview.

Singh S, Carpenter AE, Genovesio A. Singh S, et al. J Biomol Screen. 2014 Jun;19(5):640-50. doi: 10.1177/1087057114528537. Epub 2014 Apr 7. J Biomol Screen. 2014. PMID: 24710339 Free PMC article. Review.

3

Pipeline for illumination correction of images for high-throughput microscopy.

Singh S, Bray MA, Jones TR, Carpenter AE. Singh S, et al. J Microsc. 2014 Dec;256(3):231-6. doi: 10.1111/jmi.12178. Epub 2014 Sep 16. J Microsc. 2014. PMID: 25228240 Free PMC article.

4

CP-CHARM: segmentation-free image classification made accessible.

Uhlmann V, Singh S, Carpenter AE. Uhlmann V, et al. Among authors: singh s. BMC Bioinformatics. 2016 Jan 27;17:51. doi: 10.1186/s12859-016-0895-y. BMC Bioinformatics. 2016. PMID: 26817459 Free PMC article.

5

Applications in image-based profiling of perturbations.

Caicedo JC, Singh S, Carpenter AE. Caicedo JC, et al. Among authors: singh s. Curr Opin Biotechnol. 2016 Jun;39:134-142. doi: 10.1016/j.copbio.2016.04.003. Epub 2016 Apr 17. Curr Opin Biotechnol. 2016. PMID: 27089218 Free article. Review.

6

Cell Painting, a high-content image-based assay for morphological profiling using multiplexed fluorescent dyes.

Bray MA, Singh S, Han H, Davis CT, Borgeson B, Hartland C, Kost-Alimova M, Gustafsdottir SM, Gibson CC, Carpenter AE. Bray MA, et al. Among authors: singh s. Nat Protoc. 2016 Sep;11(9):1757-74. doi: 10.1038/nprot.2016.105. Epub 2016 Aug 25. Nat Protoc. 2016. PMID: 27560178 Free PMC article.

7

Capturing single-cell heterogeneity via data fusion improves image-based profiling.

Rohban MH, Abbasi HS, Singh S, Carpenter AE. Rohban MH, et al. Among authors: singh s. Nat Commun. 2019 May 7;10(1):2082. doi: 10.1038/s41467-019-10154-8. Nat Commun. 2019. PMID: 31064985 Free PMC article.

8

Predicting cell health phenotypes using image-based morphology profiling.

Way GP, Kost-Alimova M, Shibue T, Harrington WF, Gill S, Piccioni F, Becker T, Shafqat-Abbasi H, Hahn WC, Carpenter AE, Vazquez F, Singh S. Way GP, et al. Among authors: singh s. Mol Biol Cell. 2021 Apr 19;32(9):995-1005. doi: 10.1091/mbc.E20-12-0784. Epub 2021 Feb 3. Mol Biol Cell. 2021. PMID: 33534641 Free PMC article.

9

Predicting drug polypharmacology from cell morphology readouts using variational autoencoder latent space arithmetic.

Chow YL, Singh S, Carpenter AE, Way GP. Chow YL, et al. Among authors: singh s. PLoS Comput Biol. 2022 Feb 25;18(2):e1009888. doi: 10.1371/journal.pcbi.1009888. eCollection 2022 Feb. PLoS Comput Biol. 2022. PMID: 35213530 Free PMC article.

10

High-dimensional gene expression and morphology profiles of cells across 28,000 genetic and chemical perturbations.

Haghighi M, Caicedo JC, Cimini BA, Carpenter AE, Singh S. Haghighi M, et al. Among authors: singh s. Nat Methods. 2022 Dec;19(12):1550-1557. doi: 10.1038/s41592-022-01667-0. Epub 2022 Nov 7. Nat Methods. 2022. PMID: 36344834 Free PMC article.

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