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Predicting Genes in Single Genomes with AUGUSTUS.
Hoff KJ, Stanke M. Hoff KJ, et al. Curr Protoc Bioinformatics. 2019 Mar;65(1):e57. doi: 10.1002/cpbi.57. Epub 2018 Nov 22. Curr Protoc Bioinformatics. 2019. PMID: 30466165
Whole-Genome Annotation with BRAKER.
Hoff KJ, Lomsadze A, Borodovsky M, Stanke M. Hoff KJ, et al. Methods Mol Biol. 2019;1962:65-95. doi: 10.1007/978-1-4939-9173-0_5. Methods Mol Biol. 2019. PMID: 31020555 Free PMC article.
The genomic basis of evolutionary differentiation among honey bees.
Fouks B, Brand P, Nguyen HN, Herman J, Camara F, Ence D, Hagen DE, Hoff KJ, Nachweide S, Romoth L, Walden KKO, Guigo R, Stanke M, Narzisi G, Yandell M, Robertson HM, Koeniger N, Chantawannakul P, Schatz MC, Worley KC, Robinson GE, Elsik CG, Rueppell O. Fouks B, et al. Among authors: hoff kj. Genome Res. 2021 Jul;31(7):1203-1215. doi: 10.1101/gr.272310.120. Epub 2021 May 4. Genome Res. 2021. PMID: 33947700 Free PMC article.
A 20-kb lineage-specific genomic region tames virulence in pathogenic amphidiploid Verticillium longisporum.
Harting R, Starke J, Kusch H, Pöggeler S, Maurus I, Schlüter R, Landesfeind M, Bulla I, Nowrousian M, de Jonge R, Stahlhut G, Hoff KJ, Aßhauer KP, Thürmer A, Stanke M, Daniel R, Morgenstern B, Thomma BPHJ, Kronstad JW, Braus-Stromeyer SA, Braus GH. Harting R, et al. Among authors: hoff kj. Mol Plant Pathol. 2021 Aug;22(8):939-953. doi: 10.1111/mpp.13071. Epub 2021 May 5. Mol Plant Pathol. 2021. PMID: 33955130 Free PMC article.
48 results