Zhou XJ - Search Results

1

cfSNV: a software tool for the sensitive detection of somatic mutations from cell-free DNA.

Li S, Hu R, Small C, Kang TY, Liu CC, Zhou XJ, Li W. Li S, et al. Among authors: zhou xj. Nat Protoc. 2023 May;18(5):1563-1583. doi: 10.1038/s41596-023-00807-w. Epub 2023 Feb 27. Nat Protoc. 2023. PMID: 36849599 Free PMC article. Review.

2

Integrative disease classification based on cross-platform microarray data.

Liu CC, Hu J, Kalakrishnan M, Huang H, Zhou XJ. Liu CC, et al. Among authors: zhou xj. BMC Bioinformatics. 2009 Jan 30;10 Suppl 1(Suppl 1):S25. doi: 10.1186/1471-2105-10-S1-S25. BMC Bioinformatics. 2009. PMID: 19208125 Free PMC article.

3

The putative tumor suppressor microRNA-101 modulates the cancer epigenome by repressing the polycomb group protein EZH2.

Friedman JM, Liang G, Liu CC, Wolff EM, Tsai YC, Ye W, Zhou X, Jones PA. Friedman JM, et al. Cancer Res. 2009 Mar 15;69(6):2623-9. doi: 10.1158/0008-5472.CAN-08-3114. Epub 2009 Mar 3. Cancer Res. 2009. PMID: 19258506

4

Automated multidimensional phenotypic profiling using large public microarray repositories.

Xu M, Li W, James GM, Mehan MR, Zhou XJ. Xu M, et al. Among authors: zhou xj. Proc Natl Acad Sci U S A. 2009 Jul 28;106(30):12323-8. doi: 10.1073/pnas.0900883106. Epub 2009 Jul 9. Proc Natl Acad Sci U S A. 2009. PMID: 19590007 Free PMC article.

5

Unraveling complex temporal associations in cellular systems across multiple time-series microarray datasets.

Li W, Xu M, Zhou XJ. Li W, et al. Among authors: zhou xj. J Biomed Inform. 2010 Aug;43(4):550-9. doi: 10.1016/j.jbi.2009.12.006. Epub 2010 Jan 18. J Biomed Inform. 2010. PMID: 20083231 Free article.

6

Joint genome-wide profiling of miRNA and mRNA expression in Alzheimer's disease cortex reveals altered miRNA regulation.

Nunez-Iglesias J, Liu CC, Morgan TE, Finch CE, Zhou XJ. Nunez-Iglesias J, et al. Among authors: zhou xj. PLoS One. 2010 Feb 1;5(2):e8898. doi: 10.1371/journal.pone.0008898. PLoS One. 2010. PMID: 20126538 Free PMC article.

7

Bayesian approach to transforming public gene expression repositories into disease diagnosis databases.

Huang H, Liu CC, Zhou XJ. Huang H, et al. Among authors: zhou xj. Proc Natl Acad Sci U S A. 2010 Apr 13;107(15):6823-8. doi: 10.1073/pnas.0912043107. Epub 2010 Apr 1. Proc Natl Acad Sci U S A. 2010. PMID: 20360561 Free PMC article.

8

Integrative analysis of many weighted co-expression networks using tensor computation.

Li W, Liu CC, Zhang T, Li H, Waterman MS, Zhou XJ. Li W, et al. Among authors: zhou xj. PLoS Comput Biol. 2011 Jun;7(6):e1001106. doi: 10.1371/journal.pcbi.1001106. Epub 2011 Jun 16. PLoS Comput Biol. 2011. PMID: 21698123 Free PMC article.

9

Polycomb-repressed genes have permissive enhancers that initiate reprogramming.

Taberlay PC, Kelly TK, Liu CC, You JS, De Carvalho DD, Miranda TB, Zhou XJ, Liang G, Jones PA. Taberlay PC, et al. Among authors: zhou xj. Cell. 2011 Dec 9;147(6):1283-94. doi: 10.1016/j.cell.2011.10.040. Cell. 2011. PMID: 22153073 Free PMC article.

10

Algorithm to identify frequent coupled modules from two-layered network series: application to study transcription and splicing coupling.

Li W, Dai C, Liu CC, Zhou XJ. Li W, et al. Among authors: zhou xj. J Comput Biol. 2012 Jun;19(6):710-30. doi: 10.1089/cmb.2012.0025. J Comput Biol. 2012. PMID: 22697243 Free PMC article.

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