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Extending and improving metagenomic taxonomic profiling with uncharacterized species using MetaPhlAn 4.
Blanco-Míguez A, Beghini F, Cumbo F, McIver LJ, Thompson KN, Zolfo M, Manghi P, Dubois L, Huang KD, Thomas AM, Nickols WA, Piccinno G, Piperni E, Punčochář M, Valles-Colomer M, Tett A, Giordano F, Davies R, Wolf J, Berry SE, Spector TD, Franzosa EA, Pasolli E, Asnicar F, Huttenhower C, Segata N. Blanco-Míguez A, et al. Among authors: huttenhower c. Nat Biotechnol. 2023 Nov;41(11):1633-1644. doi: 10.1038/s41587-023-01688-w. Epub 2023 Feb 23. Nat Biotechnol. 2023. PMID: 36823356 Free PMC article.
Metagenomic biomarker discovery and explanation.
Segata N, Izard J, Waldron L, Gevers D, Miropolsky L, Garrett WS, Huttenhower C. Segata N, et al. Among authors: huttenhower c. Genome Biol. 2011 Jun 24;12(6):R60. doi: 10.1186/gb-2011-12-6-r60. Genome Biol. 2011. PMID: 21702898 Free PMC article.
Biodiversity and functional genomics in the human microbiome.
Morgan XC, Segata N, Huttenhower C. Morgan XC, et al. Among authors: huttenhower c. Trends Genet. 2013 Jan;29(1):51-8. doi: 10.1016/j.tig.2012.09.005. Epub 2012 Nov 7. Trends Genet. 2013. PMID: 23140990 Free PMC article. Review.
Computational meta'omics for microbial community studies.
Segata N, Boernigen D, Tickle TL, Morgan XC, Garrett WS, Huttenhower C. Segata N, et al. Among authors: huttenhower c. Mol Syst Biol. 2013 May 14;9:666. doi: 10.1038/msb.2013.22. Mol Syst Biol. 2013. PMID: 23670539 Free PMC article. Review.
314 results