Cooper EA - Search Results

1

Ten new high-quality genome assemblies for diverse bioenergy sorghum genotypes.

Voelker WG, Krishnan K, Chougule K, Alexander LC Jr, Lu Z, Olson A, Ware D, Songsomboon K, Ponce C, Brenton ZW, Boatwright JL, Cooper EA. Voelker WG, et al. Among authors: cooper ea. Front Plant Sci. 2023 Jan 4;13:1040909. doi: 10.3389/fpls.2022.1040909. eCollection 2022. Front Plant Sci. 2023. PMID: 36684744 Free PMC article.

2

A Genomic Resource for the Development, Improvement, and Exploitation of Sorghum for Bioenergy.

Brenton ZW, Cooper EA, Myers MT, Boyles RE, Shakoor N, Zielinski KJ, Rauh BL, Bridges WC, Morris GP, Kresovich S. Brenton ZW, et al. Among authors: cooper ea. Genetics. 2016 Sep;204(1):21-33. doi: 10.1534/genetics.115.183947. Epub 2016 Jun 29. Genetics. 2016. PMID: 27356613 Free PMC article.

3

Genome-Wide Association Studies of Grain Yield Components in Diverse Sorghum Germplasm.

Boyles RE, Cooper EA, Myers MT, Brenton Z, Rauh BL, Morris GP, Kresovich S. Boyles RE, et al. Among authors: cooper ea. Plant Genome. 2016 Jul;9(2). doi: 10.3835/plantgenome2015.09.0091. Plant Genome. 2016. PMID: 27898823 Free article.

4

Genetic dissection of sorghum grain quality traits using diverse and segregating populations.

Boyles RE, Pfeiffer BK, Cooper EA, Rauh BL, Zielinski KJ, Myers MT, Brenton Z, Rooney WL, Kresovich S. Boyles RE, et al. Among authors: cooper ea. Theor Appl Genet. 2017 Apr;130(4):697-716. doi: 10.1007/s00122-016-2844-6. Epub 2016 Dec 27. Theor Appl Genet. 2017. PMID: 28028582 Free PMC article.

5

A new reference genome for Sorghum bicolor reveals high levels of sequence similarity between sweet and grain genotypes: implications for the genetics of sugar metabolism.

Cooper EA, Brenton ZW, Flinn BS, Jenkins J, Shu S, Flowers D, Luo F, Wang Y, Xia P, Barry K, Daum C, Lipzen A, Yoshinaga Y, Schmutz J, Saski C, Vermerris W, Kresovich S. Cooper EA, et al. BMC Genomics. 2019 May 27;20(1):420. doi: 10.1186/s12864-019-5734-x. BMC Genomics. 2019. PMID: 31133004 Free PMC article.

6

Species-Specific Duplication Event Associated with Elevated Levels of Nonstructural Carbohydrates in Sorghum bicolor.

Brenton ZW, Juengst BT, Cooper EA, Myers MT, Jordan KE, Dale SM, Glaubitz JC, Wang X, Boyles RE, Connolly EL, Kresovich S. Brenton ZW, et al. Among authors: cooper ea. G3 (Bethesda). 2020 May 4;10(5):1511-1520. doi: 10.1534/g3.119.400921. G3 (Bethesda). 2020. PMID: 32132167 Free PMC article.

7

Genetic characterization of a Sorghum bicolor multiparent mapping population emphasizing carbon-partitioning dynamics.

Boatwright JL, Brenton ZW, Boyles RE, Sapkota S, Myers MT, Jordan KE, Dale SM, Shakoor N, Cooper EA, Morris GP, Kresovich S. Boatwright JL, et al. Among authors: cooper ea. G3 (Bethesda). 2021 Apr 15;11(4):jkab060. doi: 10.1093/g3journal/jkab060. G3 (Bethesda). 2021. PMID: 33681979 Free PMC article.

8

Genomic patterns of structural variation among diverse genotypes of Sorghum bicolor and a potential role for deletions in local adaptation.

Songsomboon K, Brenton Z, Heuser J, Kresovich S, Shakoor N, Mockler T, Cooper EA. Songsomboon K, et al. Among authors: cooper ea. G3 (Bethesda). 2021 Jul 14;11(7):jkab154. doi: 10.1093/g3journal/jkab154. G3 (Bethesda). 2021. PMID: 33950177 Free PMC article.

9

Comparative evolutionary genetics of deleterious load in sorghum and maize.

Lozano R, Gazave E, Dos Santos JPR, Stetter MG, Valluru R, Bandillo N, Fernandes SB, Brown PJ, Shakoor N, Mockler TC, Cooper EA, Taylor Perkins M, Buckler ES, Ross-Ibarra J, Gore MA. Lozano R, et al. Among authors: cooper ea. Nat Plants. 2021 Jan;7(1):17-24. doi: 10.1038/s41477-020-00834-5. Epub 2021 Jan 15. Nat Plants. 2021. PMID: 33452486

10

De novo identification and targeted sequencing of SSRs efficiently fingerprints Sorghum bicolor sub-population identity.

Baggett JP, Tillett RL, Cooper EA, Yerka MK. Baggett JP, et al. Among authors: cooper ea. PLoS One. 2021 Mar 8;16(3):e0248213. doi: 10.1371/journal.pone.0248213. eCollection 2021. PLoS One. 2021. PMID: 33684158 Free PMC article.

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