Zhang K - Search Results

1

Systematic discovery and functional dissection of enhancers needed for cancer cell fitness and proliferation.

Chen PB, Fiaux PC, Zhang K, Li B, Kubo N, Jiang S, Hu R, Rooholfada E, Wu S, Wang M, Wang W, McVicker G, Mischel PS, Ren B. Chen PB, et al. Among authors: zhang k. Cell Rep. 2022 Nov 8;41(6):111630. doi: 10.1016/j.celrep.2022.111630. Cell Rep. 2022. PMID: 36351387 Free PMC article.

2

Constructing 3D interaction maps from 1D epigenomes.

Zhu Y, Chen Z, Zhang K, Wang M, Medovoy D, Whitaker JW, Ding B, Li N, Zheng L, Wang W. Zhu Y, et al. Among authors: zhang k. Nat Commun. 2016 Mar 10;7:10812. doi: 10.1038/ncomms10812. Nat Commun. 2016. PMID: 26960733 Free PMC article.

3

Systematic identification of protein combinations mediating chromatin looping.

Zhang K, Li N, Ainsworth RI, Wang W. Zhang K, et al. Nat Commun. 2016 Jul 27;7:12249. doi: 10.1038/ncomms12249. Nat Commun. 2016. PMID: 27461729 Free PMC article.

4

Epigenetic landscapes reveal transcription factors that regulate CD8⁺ T cell differentiation.

Yu B, Zhang K, Milner JJ, Toma C, Chen R, Scott-Browne JP, Pereira RM, Crotty S, Chang JT, Pipkin ME, Wang W, Goldrath AW. Yu B, et al. Among authors: zhang k. Nat Immunol. 2017 May;18(5):573-582. doi: 10.1038/ni.3706. Epub 2017 Mar 13. Nat Immunol. 2017. PMID: 28288100 Free PMC article.

5

Runx3 programs CD8⁺ T cell residency in non-lymphoid tissues and tumours.

Milner JJ, Toma C, Yu B, Zhang K, Omilusik K, Phan AT, Wang D, Getzler AJ, Nguyen T, Crotty S, Wang W, Pipkin ME, Goldrath AW. Milner JJ, et al. Among authors: zhang k. Nature. 2017 Dec 14;552(7684):253-257. doi: 10.1038/nature24993. Epub 2017 Dec 6. Nature. 2017. PMID: 29211713 Free PMC article.

6

Bayesian Networks Predict Neuronal Transdifferentiation.

Ainsworth RI, Ai R, Ding B, Li N, Zhang K, Wang W. Ainsworth RI, et al. Among authors: zhang k. G3 (Bethesda). 2018 Jul 2;8(7):2501-2511. doi: 10.1534/g3.118.200401. G3 (Bethesda). 2018. PMID: 29848620 Free PMC article.

7

Integrative analysis with expanded DNA methylation data reveals common key regulators and pathways in cancers.

Fan S, Tang J, Li N, Zhao Y, Ai R, Zhang K, Wang M, Du W, Wang W. Fan S, et al. Among authors: zhang k. NPJ Genom Med. 2019 Feb 1;4:2. doi: 10.1038/s41525-019-0077-8. eCollection 2019. NPJ Genom Med. 2019. PMID: 30729033 Free PMC article.

8

Epigenomic analysis reveals DNA motifs regulating histone modifications in human and mouse.

Ngo V, Chen Z, Zhang K, Whitaker JW, Wang M, Wang W. Ngo V, et al. Among authors: zhang k. Proc Natl Acad Sci U S A. 2019 Feb 26;116(9):3668-3677. doi: 10.1073/pnas.1813565116. Epub 2019 Feb 12. Proc Natl Acad Sci U S A. 2019. PMID: 30755522 Free PMC article.

9

Taiji: System-level identification of key transcription factors reveals transcriptional waves in mouse embryonic development.

Zhang K, Wang M, Zhao Y, Wang W. Zhang K, et al. Sci Adv. 2019 Mar 27;5(3):eaav3262. doi: 10.1126/sciadv.aav3262. eCollection 2019 Mar. Sci Adv. 2019. PMID: 30944857 Free PMC article.

10

Motto: Representing Motifs in Consensus Sequences with Minimum Information Loss.

Wang M, Wang D, Zhang K, Ngo V, Fan S, Wang W. Wang M, et al. Among authors: zhang k. Genetics. 2020 Oct;216(2):353-358. doi: 10.1534/genetics.120.303597. Epub 2020 Aug 19. Genetics. 2020. PMID: 32816922 Free PMC article.

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