Liu L - Search Results

1

KnockoffTrio: A knockoff framework for the identification of putative causal variants in genome-wide association studies with trio design.

Yang Y, Wang C, Liu L, Buxbaum J, He Z, Ionita-Laza I. Yang Y, et al. Among authors: liu l. Am J Hum Genet. 2022 Oct 6;109(10):1761-1776. doi: 10.1016/j.ajhg.2022.08.013. Epub 2022 Sep 22. Am J Hum Genet. 2022. PMID: 36150388 Free PMC article.

2

A semi-supervised approach for predicting cell-type specific functional consequences of non-coding variation using MPRAs.

He Z, Liu L, Wang K, Ionita-Laza I. He Z, et al. Among authors: liu l. Nat Commun. 2018 Dec 5;9(1):5199. doi: 10.1038/s41467-018-07349-w. Nat Commun. 2018. PMID: 30518757 Free PMC article.

3

Identification of putative causal loci in whole-genome sequencing data via knockoff statistics.

He Z, Liu L, Wang C, Le Guen Y, Lee J, Gogarten S, Lu F, Montgomery S, Tang H, Silverman EK, Cho MH, Greicius M, Ionita-Laza I. He Z, et al. Among authors: liu l. Nat Commun. 2021 May 25;12(1):3152. doi: 10.1038/s41467-021-22889-4. Nat Commun. 2021. PMID: 34035245 Free PMC article.

4

Genome-wide analysis of common and rare variants via multiple knockoffs at biobank scale, with an application to Alzheimer disease genetics.

He Z, Le Guen Y, Liu L, Lee J, Ma S, Yang AC, Liu X, Rutledge J, Losada PM, Song B, Belloy ME, Butler RR 3rd, Longo FM, Tang H, Mormino EC, Wyss-Coray T, Greicius MD, Ionita-Laza I. He Z, et al. Among authors: liu x, liu l. Am J Hum Genet. 2021 Dec 2;108(12):2336-2353. doi: 10.1016/j.ajhg.2021.10.009. Epub 2021 Nov 11. Am J Hum Genet. 2021. PMID: 34767756 Free PMC article.

5

Powerful gene-based testing by integrating long-range chromatin interactions and knockoff genotypes.

Ma S, Dalgleish J, Lee J, Wang C, Liu L, Gill R, Buxbaum JD, Chung WK, Aschard H, Silverman EK, Cho MH, He Z, Ionita-Laza I. Ma S, et al. Among authors: liu l. Proc Natl Acad Sci U S A. 2021 Nov 23;118(47):e2105191118. doi: 10.1073/pnas.2105191118. Proc Natl Acad Sci U S A. 2021. PMID: 34799441 Free PMC article.

6

GhostKnockoff inference empowers identification of putative causal variants in genome-wide association studies.

He Z, Liu L, Belloy ME, Le Guen Y, Sossin A, Liu X, Qi X, Ma S, Gyawali PK, Wyss-Coray T, Tang H, Sabatti C, Candès E, Greicius MD, Ionita-Laza I. He Z, et al. Among authors: liu x, liu l. Nat Commun. 2022 Nov 23;13(1):7209. doi: 10.1038/s41467-022-34932-z. Nat Commun. 2022. PMID: 36418338 Free PMC article.

7

BIGKnock: fine-mapping gene-based associations via knockoff analysis of biobank-scale data.

Ma S, Wang C, Khan A, Liu L, Dalgleish J, Kiryluk K, He Z, Ionita-Laza I. Ma S, et al. Among authors: liu l. Genome Biol. 2023 Feb 13;24(1):24. doi: 10.1186/s13059-023-02864-6. Genome Biol. 2023. PMID: 36782330 Free PMC article.

8

CARMA is a new Bayesian model for fine-mapping in genome-wide association meta-analyses.

Yang Z, Wang C, Liu L, Khan A, Lee A, Vardarajan B, Mayeux R, Kiryluk K, Ionita-Laza I. Yang Z, et al. Among authors: liu l. Nat Genet. 2023 Jun;55(6):1057-1065. doi: 10.1038/s41588-023-01392-0. Epub 2023 May 11. Nat Genet. 2023. PMID: 37169873

9

Beyond guilty by association at scale: searching for causal variants on the basis of genome-wide summary statistics.

He Z, Chu B, Yang J, Gu J, Chen Z, Liu L, Morrison T, Belloy ME, Qi X, Hejazi N, Mathur M, Le Guen Y, Tang H, Hastie T, Ionita-Laza I, Sabatti C, Candès E. He Z, et al. Among authors: liu l. bioRxiv [Preprint]. 2024 May 2:2024.02.28.582621. doi: 10.1101/2024.02.28.582621. bioRxiv. 2024. PMID: 38464202 Free PMC article. Preprint.

10

Convergence rates of a partition based Bayesian multivariate density estimation method.

Liu L, Li D, Wong WH. Liu L, et al. Adv Neural Inf Process Syst. 2017 Dec;30:4738-4746. Adv Neural Inf Process Syst. 2017. PMID: 31341369 Free PMC article.

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