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Genomic surveillance of SARS-CoV-2 Omicron variants on a university campus.
Weil AA, Luiten KG, Casto AM, Bennett JC, O'Hanlon J, Han PD, Gamboa LS, McDermot E, Truong M, Gottlieb GS, Acker Z, Wolf CR, Magedson A, Chow EJ, Lo NK, Pothan LC, McDonald D, Wright TC, McCaffrey KM, Figgins MD, Englund JA, Boeckh M, Lockwood CM, Nickerson DA, Shendure J, Bedford T, Hughes JP, Starita LM, Chu HY. Weil AA, et al. Among authors: starita lm. Nat Commun. 2022 Sep 6;13(1):5240. doi: 10.1038/s41467-022-32786-z. Nat Commun. 2022. PMID: 36068236 Free PMC article.
CRaTER enrichment for on-target gene-editing enables generation of variant libraries in hiPSCs.
Friedman CE, Fayer S, Pendyala S, Chien WM, Tran L, Chao L, Mckinstry A, Karbassi E, Fenix AM, Loiben A, Murry CE, Starita LM, Fowler DM, Yang KC. Friedman CE, et al. Among authors: starita lm. bioRxiv [Preprint]. 2023 Jan 26:2023.01.25.525582. doi: 10.1101/2023.01.25.525582. bioRxiv. 2023. Update in: J Mol Cell Cardiol. 2023 Jun;179:60-71. doi: 10.1016/j.yjmcc.2023.03.017. PMID: 36747685 Free PMC article. Updated. Preprint.
Defining and Reducing Variant Classification Disparities.
Dawood M, Fayer S, Pendyala S, Post M, Kalra D, Patterson K, Venner E, Muffley LA, Fowler DM, Rubin AF, Posey JE, Plon SE, Lupski JR, Gibbs RA, Starita LM, Robles-Espinoza CD, Coyote-Maestas W, Gallego Romero I. Dawood M, et al. Among authors: starita lm. medRxiv [Preprint]. 2024 Apr 12:2024.04.11.24305690. doi: 10.1101/2024.04.11.24305690. medRxiv. 2024. PMID: 38645101 Free PMC article. Preprint.
Massively parallel single-amino-acid mutagenesis.
Kitzman JO, Starita LM, Lo RS, Fields S, Shendure J. Kitzman JO, et al. Among authors: starita lm. Nat Methods. 2015 Mar;12(3):203-6, 4 p following 206. doi: 10.1038/nmeth.3223. Epub 2015 Jan 5. Nat Methods. 2015. PMID: 25559584 Free PMC article.
Massively Parallel Functional Analysis of BRCA1 RING Domain Variants.
Starita LM, Young DL, Islam M, Kitzman JO, Gullingsrud J, Hause RJ, Fowler DM, Parvin JD, Shendure J, Fields S. Starita LM, et al. Genetics. 2015 Jun;200(2):413-22. doi: 10.1534/genetics.115.175802. Epub 2015 Mar 30. Genetics. 2015. PMID: 25823446 Free PMC article.
Variant Interpretation: Functional Assays to the Rescue.
Starita LM, Ahituv N, Dunham MJ, Kitzman JO, Roth FP, Seelig G, Shendure J, Fowler DM. Starita LM, et al. Am J Hum Genet. 2017 Sep 7;101(3):315-325. doi: 10.1016/j.ajhg.2017.07.014. Am J Hum Genet. 2017. PMID: 28886340 Free PMC article.
On the design of CRISPR-based single-cell molecular screens.
Hill AJ, McFaline-Figueroa JL, Starita LM, Gasperini MJ, Matreyek KA, Packer J, Jackson D, Shendure J, Trapnell C. Hill AJ, et al. Among authors: starita lm. Nat Methods. 2018 Apr;15(4):271-274. doi: 10.1038/nmeth.4604. Epub 2018 Feb 19. Nat Methods. 2018. PMID: 29457792 Free PMC article.
Multiplex assessment of protein variant abundance by massively parallel sequencing.
Matreyek KA, Starita LM, Stephany JJ, Martin B, Chiasson MA, Gray VE, Kircher M, Khechaduri A, Dines JN, Hause RJ, Bhatia S, Evans WE, Relling MV, Yang W, Shendure J, Fowler DM. Matreyek KA, et al. Among authors: starita lm. Nat Genet. 2018 Jun;50(6):874-882. doi: 10.1038/s41588-018-0122-z. Epub 2018 May 21. Nat Genet. 2018. PMID: 29785012 Free PMC article.
Accurate classification of BRCA1 variants with saturation genome editing.
Findlay GM, Daza RM, Martin B, Zhang MD, Leith AP, Gasperini M, Janizek JD, Huang X, Starita LM, Shendure J. Findlay GM, et al. Among authors: starita lm. Nature. 2018 Oct;562(7726):217-222. doi: 10.1038/s41586-018-0461-z. Epub 2018 Sep 12. Nature. 2018. PMID: 30209399 Free PMC article.
115 results