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Page 1
Applications of Machine Learning in Human Microbiome Studies: A Review on Feature Selection, Biomarker Identification, Disease Prediction and Treatment.
Marcos-Zambrano LJ, Karaduzovic-Hadziabdic K, Loncar Turukalo T, Przymus P, Trajkovik V, Aasmets O, Berland M, Gruca A, Hasic J, Hron K, Klammsteiner T, Kolev M, Lahti L, Lopes MB, Moreno V, Naskinova I, Org E, Paciência I, Papoutsoglou G, Shigdel R, Stres B, Vilne B, Yousef M, Zdravevski E, Tsamardinos I, Carrillo de Santa Pau E, Claesson MJ, Moreno-Indias I, Truu J. Marcos-Zambrano LJ, et al. Among authors: aasmets o. Front Microbiol. 2021 Feb 19;12:634511. doi: 10.3389/fmicb.2021.634511. eCollection 2021. Front Microbiol. 2021. PMID: 33737920 Free PMC article. Review.
The Gut Microbiome in Polycystic Ovary Syndrome and Its Association with Metabolic Traits.
Lüll K, Arffman RK, Sola-Leyva A, Molina NM, Aasmets O, Herzig KH, Plaza-Díaz J, Franks S, Morin-Papunen L, Tapanainen JS, Salumets A, Altmäe S, Piltonen TT, Org E. Lüll K, et al. Among authors: aasmets o. J Clin Endocrinol Metab. 2021 Mar 8;106(3):858-871. doi: 10.1210/clinem/dgaa848. J Clin Endocrinol Metab. 2021. PMID: 33205157
Fecal microbial load is a major determinant of gut microbiome variation and a confounder for disease associations.
Nishijima S, Stankevic E, Aasmets O, Schmidt TSB, Nagata N, Keller MI, Ferretti P, Juel HB, Fullam A, Robbani SM, Schudoma C, Hansen JK, Holm LA, Israelsen M, Schierwagen R, Torp N, Telzerow A, Hercog R, Kandels S, Hazenbrink DHM, Arumugam M, Bendtsen F, Brøns C, Fonvig CE, Holm JC, Nielsen T, Pedersen JS, Thiele MS, Trebicka J, Org E, Krag A, Hansen T, Kuhn M, Bork P; GALAXY and MicrobLiver Consortia. Nishijima S, et al. Among authors: aasmets o. Cell. 2024 Nov 4:S0092-8674(24)01204-2. doi: 10.1016/j.cell.2024.10.022. Online ahead of print. Cell. 2024. PMID: 39541968 Free article.
Comorbidities confound metabolomics studies of human disease.
Jaagura M, Kronberg J, Reigo A, Aasmets O, Nikopensius T, Võsa U, Bomba L; Estonian Biobank research team; Estrada K, Wuster A, Esko T, Org E. Jaagura M, et al. Among authors: aasmets o. Sci Rep. 2024 Oct 22;14(1):24810. doi: 10.1038/s41598-024-75556-1. Sci Rep. 2024. PMID: 39438584 Free PMC article.
Correction: Gut microbiome in endometriosis: a cohort study on 1000 individuals.
Pérez-Prieto I, Vargas E, Salas-Espejo E, Lüll K, Canha-Gouveia A, Pérez LA, Fontes J, Salumets A, Andreson R, Aasmets O; Estonian Biobank research team; Whiteson K, Org E, Altmäe S. Pérez-Prieto I, et al. Among authors: aasmets o. BMC Med. 2024 Oct 10;22(1):448. doi: 10.1186/s12916-024-03692-6. BMC Med. 2024. PMID: 39390603 Free PMC article. No abstract available.
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