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Page 1
Transcription Factor Repertoire of Homeostatic Eosinophilopoiesis.
Bouffi C, Kartashov AV, Schollaert KL, Chen X, Bacon WC, Weirauch MT, Barski A, Fulkerson PC. Bouffi C, et al. Among authors: barski a. J Immunol. 2015 Sep 15;195(6):2683-95. doi: 10.4049/jimmunol.1500510. Epub 2015 Aug 12. J Immunol. 2015. PMID: 26268651 Free PMC article.
Transcription factors operate across disease loci, with EBNA2 implicated in autoimmunity.
Harley JB, Chen X, Pujato M, Miller D, Maddox A, Forney C, Magnusen AF, Lynch A, Chetal K, Yukawa M, Barski A, Salomonis N, Kaufman KM, Kottyan LC, Weirauch MT. Harley JB, et al. Among authors: barski a. Nat Genet. 2018 May;50(5):699-707. doi: 10.1038/s41588-018-0102-3. Epub 2018 Apr 16. Nat Genet. 2018. PMID: 29662164 Free PMC article.
Microbiota-sensitive epigenetic signature predicts inflammation in Crohn's disease.
Kelly D, Kotliar M, Woo V, Jagannathan S, Whitt J, Moncivaiz J, Aronow BJ, Dubinsky MC, Hyams JS, Markowitz JF, Baldassano RN, Stephens MC, Walters TD, Kugathasan S, Haberman Y, Sundaram N, Rosen MJ, Helmrath M, Karns R, Barski A, Denson LA, Alenghat T. Kelly D, et al. Among authors: barski a. JCI Insight. 2018 Sep 20;3(18):e122104. doi: 10.1172/jci.insight.122104. eCollection 2018 Sep 20. JCI Insight. 2018. PMID: 30232290 Free PMC article.
Genetic, Inflammatory, and Epithelial Cell Differentiation Factors Control Expression of Human Calpain-14.
Miller DE, Forney C, Rochman M, Cranert S, Habel J, Rymer J, Lynch A, Schroeder C, Lee J, Sauder A, Smith Q, Chawla M, Trimarchi MP, Lu X, Fjellman E, Brusilovsky M, Barski A, Waggoner S, Weirauch MT, Rothenberg ME, Kottyan LC. Miller DE, et al. Among authors: barski a. G3 (Bethesda). 2019 Mar 7;9(3):729-736. doi: 10.1534/g3.118.200901. G3 (Bethesda). 2019. PMID: 30626591 Free PMC article.
CWL-Airflow: a lightweight pipeline manager supporting Common Workflow Language.
Kotliar M, Kartashov AV, Barski A. Kotliar M, et al. Among authors: barski a. Gigascience. 2019 Jul 1;8(7):giz084. doi: 10.1093/gigascience/giz084. Gigascience. 2019. PMID: 31321430 Free PMC article.
A sample CWL pipeline for processing of chromatin immunoprecipitation sequencing data is provided. CONCLUSIONS: CWL-Airflow will provide users with the features of a fully fledged pipeline manager and the ability to execute CWL workflows anywhere Airflow can run-fro …
A sample CWL pipeline for processing of chromatin immunoprecipitation sequencing data is provided. CONCLUSIONS: CWL-Airflow will prov …
Identification of anoctamin 1 (ANO1) as a key driver of esophageal epithelial proliferation in eosinophilic esophagitis.
Vanoni S, Zeng C, Marella S, Uddin J, Wu D, Arora K, Ptaschinski C, Que J, Noah T, Waggoner L, Barski A, Kartashov A, Rochman M, Wen T, Martin L, Spence J, Collins M, Mukkada V, Putnam P, Naren A, Chehade M, Rothenberg ME, Hogan SP. Vanoni S, et al. Among authors: barski a. J Allergy Clin Immunol. 2020 Jan;145(1):239-254.e2. doi: 10.1016/j.jaci.2019.07.049. Epub 2019 Oct 21. J Allergy Clin Immunol. 2020. PMID: 31647967 Free PMC article. Clinical Trial.
77 results