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Page 1
Multiomic atlas with functional stratification and developmental dynamics of zebrafish cis-regulatory elements.
Baranasic D, Hörtenhuber M, Balwierz PJ, Zehnder T, Mukarram AK, Nepal C, Várnai C, Hadzhiev Y, Jimenez-Gonzalez A, Li N, Wragg J, D'Orazio FM, Relic D, Pachkov M, Díaz N, Hernández-Rodríguez B, Chen Z, Stoiber M, Dong M, Stevens I, Ross SE, Eagle A, Martin R, Obasaju O, Rastegar S, McGarvey AC, Kopp W, Chambers E, Wang D, Kim HR, Acemel RD, Naranjo S, Łapiński M, Chong V, Mathavan S, Peers B, Sauka-Spengler T, Vingron M, Carninci P, Ohler U, Lacadie SA, Burgess SM, Winata C, van Eeden F, Vaquerizas JM, Gómez-Skarmeta JL, Onichtchouk D, Brown BJ, Bogdanovic O, van Nimwegen E, Westerfield M, Wardle FC, Daub CO, Lenhard B, Müller F. Baranasic D, et al. Among authors: hortenhuber m. Nat Genet. 2022 Jul;54(7):1037-1050. doi: 10.1038/s41588-022-01089-w. Epub 2022 Jul 4. Nat Genet. 2022. PMID: 35789323 Free PMC article.
Ten simple rules for annotating sequencing experiments.
Stevens I, Mukarram AK, Hörtenhuber M, Meehan TF, Rung J, Daub CO. Stevens I, et al. Among authors: hortenhuber m. PLoS Comput Biol. 2020 Oct 5;16(10):e1008260. doi: 10.1371/journal.pcbi.1008260. eCollection 2020 Oct. PLoS Comput Biol. 2020. PMID: 33017400 Free PMC article. No abstract available.
Dog colour patterns explained by modular promoters of ancient canid origin.
Bannasch DL, Kaelin CB, Letko A, Loechel R, Hug P, Jagannathan V, Henkel J, Roosje P, Hytönen MK, Lohi H, Arumilli M; DoGA consortium; Minor KM, Mickelson JR, Drögemüller C, Barsh GS, Leeb T. Bannasch DL, et al. Nat Ecol Evol. 2021 Oct;5(10):1415-1423. doi: 10.1038/s41559-021-01524-x. Epub 2021 Aug 12. Nat Ecol Evol. 2021. PMID: 34385618 Free PMC article.
Identification of novel genetic risk factors of dilated cardiomyopathy: from canine to human.
Niskanen JE, Ohlsson Å, Ljungvall I, Drögemüller M, Ernst RF, Dooijes D, van Deutekom HWM, van Tintelen JP, Snijders Blok CJB, van Vugt M, van Setten J, Asselbergs FW, Petrič AD, Salonen M, Hundi S, Hörtenhuber M; DoGA consortium; Kere J, Pyle WG, Donner J, Postma AV, Leeb T, Andersson G, Hytönen MK, Häggström J, Wiberg M, Friederich J, Eberhard J, Harakalova M, van Steenbeek FG, Wess G, Lohi H. Niskanen JE, et al. Among authors: hortenhuber m. Genome Med. 2023 Sep 18;15(1):73. doi: 10.1186/s13073-023-01221-3. Genome Med. 2023. PMID: 37723491 Free PMC article.
The DoGA consortium expression atlas of promoters and genes in 100 canine tissues.
Hörtenhuber M, Hytönen MK, Mukarram AK, Arumilli M, Araujo CL, Quintero I, Syrjä P, Airas N, Kaukonen M, Kyöstilä K, Niskanen J, Jokinen TS, Mottaghitalab F, Takan I, Salokorpi N, Raman A, Stevens I, Iivanainen A, Yoshihara M, Gusev O, Bannasch D, Sukura A, Schoenebeck JJ; DoGA Consortium; Ezer S, Katayama S, Daub CO, Kere J, Lohi H. Hörtenhuber M, et al. Nat Commun. 2024 Oct 21;15(1):9082. doi: 10.1038/s41467-024-52798-1. Nat Commun. 2024. PMID: 39433728 Free PMC article.
A putative silencer variant in a spontaneous canine model of retinitis pigmentosa.
Kaukonen M, Quintero IB, Mukarram AK, Hytönen MK, Holopainen S, Wickström K, Kyöstilä K, Arumilli M, Jalomäki S, Daub CO, Kere J, Lohi H; DoGA Consortium. Kaukonen M, et al. PLoS Genet. 2020 Mar 9;16(3):e1008659. doi: 10.1371/journal.pgen.1008659. eCollection 2020 Mar. PLoS Genet. 2020. PMID: 32150541 Free PMC article.