Lyu P - Search Results

1

LRLoop: a method to predict feedback loops in cell-cell communication.

Xin Y, Lyu P, Jiang J, Zhou F, Wang J, Blackshaw S, Qian J. Xin Y, et al. Among authors: lyu p. Bioinformatics. 2022 Sep 2;38(17):4117-4126. doi: 10.1093/bioinformatics/btac447. Bioinformatics. 2022. PMID: 35788263 Free PMC article.

2

Control of neurogenic competence in mammalian hypothalamic tanycytes.

Yoo S, Kim J, Lyu P, Hoang TV, Ma A, Trinh V, Dai W, Jiang L, Leavey P, Duncan L, Won JK, Park SH, Qian J, Brown SP, Blackshaw S. Yoo S, et al. Among authors: lyu p. Sci Adv. 2021 May 28;7(22):eabg3777. doi: 10.1126/sciadv.abg3777. Print 2021 May. Sci Adv. 2021. PMID: 34049878 Free PMC article.

3

Gene regulatory networks controlling temporal patterning, neurogenesis, and cell-fate specification in mammalian retina.

Lyu P, Hoang T, Santiago CP, Thomas ED, Timms AE, Appel H, Gimmen M, Le N, Jiang L, Kim DW, Chen S, Espinoza DF, Telger AE, Weir K, Clark BS, Cherry TJ, Qian J, Blackshaw S. Lyu P, et al. Cell Rep. 2021 Nov 16;37(7):109994. doi: 10.1016/j.celrep.2021.109994. Cell Rep. 2021. PMID: 34788628 Free PMC article.

4

Cell-specific cis-regulatory elements and mechanisms of non-coding genetic disease in human retina and retinal organoids.

Thomas ED, Timms AE, Giles S, Harkins-Perry S, Lyu P, Hoang T, Qian J, Jackson VE, Bahlo M, Blackshaw S, Friedlander M, Eade K, Cherry TJ. Thomas ED, et al. Among authors: lyu p. Dev Cell. 2022 Mar 28;57(6):820-836.e6. doi: 10.1016/j.devcel.2022.02.018. Epub 2022 Mar 17. Dev Cell. 2022. PMID: 35303433 Free PMC article.

5

IReNA: Integrated regulatory network analysis of single-cell transcriptomes and chromatin accessibility profiles.

Jiang J, Lyu P, Li J, Huang S, Tao J, Blackshaw S, Qian J, Wang J. Jiang J, et al. Among authors: lyu p. iScience. 2022 Oct 14;25(11):105359. doi: 10.1016/j.isci.2022.105359. eCollection 2022 Nov 18. iScience. 2022. PMID: 36325073 Free PMC article.

6

Engineered extracellular vesicles as versatile ribonucleoprotein delivery vehicles for efficient and safe CRISPR genome editing.

Yao X, Lyu P, Yoo K, Yadav MK, Singh R, Atala A, Lu B. Yao X, et al. Among authors: lyu p. J Extracell Vesicles. 2021 Mar;10(5):e12076. doi: 10.1002/jev2.12076. Epub 2021 Mar 16. J Extracell Vesicles. 2021. PMID: 33747370 Free PMC article.

7

Delivering SaCas9 mRNA by lentivirus-like bionanoparticles for transient expression and efficient genome editing.

Lu B, Javidi-Parsijani P, Makani V, Mehraein-Ghomi F, Sarhan WM, Sun D, Yoo KW, Atala ZP, Lyu P, Atala A. Lu B, et al. Among authors: lyu p. Nucleic Acids Res. 2019 May 7;47(8):e44. doi: 10.1093/nar/gkz093. Nucleic Acids Res. 2019. PMID: 30759231 Free PMC article.

8

Delivering Cas9/sgRNA ribonucleoprotein (RNP) by lentiviral capsid-based bionanoparticles for efficient 'hit-and-run' genome editing.

Lyu P, Javidi-Parsijani P, Atala A, Lu B. Lyu P, et al. Nucleic Acids Res. 2019 Sep 26;47(17):e99. doi: 10.1093/nar/gkz605. Nucleic Acids Res. 2019. PMID: 31299082 Free PMC article.

9

CRISPR/Cas9 increases mitotic gene conversion in human cells.

Javidi-Parsijani P, Lyu P, Makani V, Sarhan WM, Yoo KW, El-Korashi L, Atala A, Lu B. Javidi-Parsijani P, et al. Among authors: lyu p. Gene Ther. 2020 Jun;27(6):281-296. doi: 10.1038/s41434-020-0126-z. Epub 2020 Feb 4. Gene Ther. 2020. PMID: 32020049

10

Sensitive and reliable evaluation of single-cut sgRNAs to restore dystrophin by a GFP-reporter assay.

Lyu P, Yoo KW, Yadav MK, Atala A, Aartsma-Rus A, Putten MV, Duan D, Lu B. Lyu P, et al. PLoS One. 2020 Sep 24;15(9):e0239468. doi: 10.1371/journal.pone.0239468. eCollection 2020. PLoS One. 2020. PMID: 32970732 Free PMC article.

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