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Stone Age Yersinia pestis genomes shed light on the early evolution, diversity, and ecology of plague.
Andrades Valtueña A, Neumann GU, Spyrou MA, Musralina L, Aron F, Beisenov A, Belinskiy AB, Bos KI, Buzhilova A, Conrad M, Djansugurova LB, Dobeš M, Ernée M, Fernández-Eraso J, Frohlich B, Furmanek M, Hałuszko A, Hansen S, Harney É, Hiss AN, Hübner A, Key FM, Khussainova E, Kitov E, Kitova AO, Knipper C, Kühnert D, Lalueza-Fox C, Littleton J, Massy K, Mittnik A, Mujika-Alustiza JA, Olalde I, Papac L, Penske S, Peška J, Pinhasi R, Reich D, Reinhold S, Stahl R, Stäuble H, Tukhbatova RI, Vasilyev S, Veselovskaya E, Warinner C, Stockhammer PW, Haak W, Krause J, Herbig A. Andrades Valtueña A, et al. Among authors: key fm. Proc Natl Acad Sci U S A. 2022 Apr 26;119(17):e2116722119. doi: 10.1073/pnas.2116722119. Epub 2022 Apr 11. Proc Natl Acad Sci U S A. 2022. PMID: 35412864 Free PMC article.
The Stone Age Plague and Its Persistence in Eurasia.
Andrades Valtueña A, Mittnik A, Key FM, Haak W, Allmäe R, Belinskij A, Daubaras M, Feldman M, Jankauskas R, Janković I, Massy K, Novak M, Pfrengle S, Reinhold S, Šlaus M, Spyrou MA, Szécsényi-Nagy A, Tõrv M, Hansen S, Bos KI, Stockhammer PW, Herbig A, Krause J. Andrades Valtueña A, et al. Among authors: key fm. Curr Biol. 2017 Dec 4;27(23):3683-3691.e8. doi: 10.1016/j.cub.2017.10.025. Epub 2017 Nov 22. Curr Biol. 2017. PMID: 29174893 Free article.
Neolithic and medieval virus genomes reveal complex evolution of hepatitis B.
Krause-Kyora B, Susat J, Key FM, Kühnert D, Bosse E, Immel A, Rinne C, Kornell SC, Yepes D, Franzenburg S, Heyne HO, Meier T, Lösch S, Meller H, Friederich S, Nicklisch N, Alt KW, Schreiber S, Tholey A, Herbig A, Nebel A, Krause J. Krause-Kyora B, et al. Among authors: key fm. Elife. 2018 May 10;7:e36666. doi: 10.7554/eLife.36666. Elife. 2018. PMID: 29745896 Free PMC article.
Phylogeography of the second plague pandemic revealed through analysis of historical Yersinia pestis genomes.
Spyrou MA, Keller M, Tukhbatova RI, Scheib CL, Nelson EA, Andrades Valtueña A, Neumann GU, Walker D, Alterauge A, Carty N, Cessford C, Fetz H, Gourvennec M, Hartle R, Henderson M, von Heyking K, Inskip SA, Kacki S, Key FM, Knox EL, Later C, Maheshwari-Aplin P, Peters J, Robb JE, Schreiber J, Kivisild T, Castex D, Lösch S, Harbeck M, Herbig A, Bos KI, Krause J. Spyrou MA, et al. Among authors: key fm. Nat Commun. 2019 Oct 2;10(1):4470. doi: 10.1038/s41467-019-12154-0. Nat Commun. 2019. PMID: 31578321 Free PMC article.
Emergence of human-adapted Salmonella enterica is linked to the Neolithization process.
Key FM, Posth C, Esquivel-Gomez LR, Hübler R, Spyrou MA, Neumann GU, Furtwängler A, Sabin S, Burri M, Wissgott A, Lankapalli AK, Vågene ÅJ, Meyer M, Nagel S, Tukhbatova R, Khokhlov A, Chizhevsky A, Hansen S, Belinsky AB, Kalmykov A, Kantorovich AR, Maslov VE, Stockhammer PW, Vai S, Zavattaro M, Riga A, Caramelli D, Skeates R, Beckett J, Gradoli MG, Steuri N, Hafner A, Ramstein M, Siebke I, Lösch S, Erdal YS, Alikhan NF, Zhou Z, Achtman M, Bos K, Reinhold S, Haak W, Kühnert D, Herbig A, Krause J. Key FM, et al. Nat Ecol Evol. 2020 Mar;4(3):324-333. doi: 10.1038/s41559-020-1106-9. Epub 2020 Feb 24. Nat Ecol Evol. 2020. PMID: 32094538 Free PMC article.
Analysis of Genomic DNA from Medieval Plague Victims Suggests Long-Term Effect of Yersinia pestis on Human Immunity Genes.
Immel A, Key FM, Szolek A, Barquera R, Robinson MK, Harrison GF, Palmer WH, Spyrou MA, Susat J, Krause-Kyora B, Bos KI, Forrest S, Hernández-Zaragoza DI, Sauter J, Solloch U, Schmidt AH, Schuenemann VJ, Reiter E, Kairies MS, Weiß R, Arnold S, Wahl J, Hollenbach JA, Kohlbacher O, Herbig A, Norman PJ, Krause J. Immel A, et al. Among authors: key fm. Mol Biol Evol. 2021 Sep 27;38(10):4059-4076. doi: 10.1093/molbev/msab147. Mol Biol Evol. 2021. PMID: 34002224 Free PMC article.
Ten millennia of hepatitis B virus evolution.
Kocher A, Papac L, Barquera R, Key FM, Spyrou MA, Hübler R, Rohrlach AB, Aron F, Stahl R, Wissgott A, van Bömmel F, Pfefferkorn M, Mittnik A, Villalba-Mouco V, Neumann GU, Rivollat M, van de Loosdrecht MS, Majander K, Tukhbatova RI, Musralina L, Ghalichi A, Penske S, Sabin S, Michel M, Gretzinger J, Nelson EA, Ferraz T, Nägele K, Parker C, Keller M, Guevara EK, Feldman M, Eisenmann S, Skourtanioti E, Giffin K, Gnecchi-Ruscone GA, Friederich S, Schimmenti V, Khartanovich V, Karapetian MK, Chaplygin MS, Kufterin VV, Khokhlov AA, Chizhevsky AA, Stashenkov DA, Kochkina AF, Tejedor-Rodríguez C, de Lagrán ÍG, Arcusa-Magallón H, Garrido-Pena R, Royo-Guillén JI, Nováček J, Rottier S, Kacki S, Saintot S, Kaverzneva E, Belinskiy AB, Velemínský P, Limburský P, Kostka M, Loe L, Popescu E, Clarke R, Lyons A, Mortimer R, Sajantila A, de Armas YC, Hernandez Godoy ST, Hernández-Zaragoza DI, Pearson J, Binder D, Lefranc P, Kantorovich AR, Maslov VE, Lai L, Zoledziewska M, Beckett JF, Langová M, Danielisová A, Ingman T, Atiénzar GG, de Miguel Ibáñez MP, Romero A, Sperduti A, Beckett S, Salter SJ, Zilivinskaya ED, Vasil'ev DV, von Heyking K, Burger RL, Salazar LC, Amkreutz L, Navruzbekov M, R… See abstract for full author list ➔ Kocher A, et al. Among authors: key fm. Science. 2021 Oct 8;374(6564):182-188. doi: 10.1126/science.abi5658. Epub 2021 Oct 7. Science. 2021. PMID: 34618559
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