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Beyondcell: targeting cancer therapeutic heterogeneity in single-cell RNA-seq data.
Fustero-Torre C, Jiménez-Santos MJ, García-Martín S, Carretero-Puche C, García-Jimeno L, Ivanchuk V, Di Domenico T, Gómez-López G, Al-Shahrour F. Fustero-Torre C, et al. Among authors: gomez lopez g. Genome Med. 2021 Dec 16;13(1):187. doi: 10.1186/s13073-021-01001-x. Genome Med. 2021. PMID: 34911571 Free PMC article.
Functional signatures identified in B-cell non-Hodgkin lymphoma profiles.
Aggarwal M, Sánchez-Beato M, Gómez-López G, Al-Shahrour F, Martínez N, Rodríguez A, Ruiz-Ballesteros E, Camacho FI, Pérez-Rosado A, de la Cueva P, Artiga MJ, Pisano DG, Kimby E, Dopazo J, Villuendas R, Piris MA. Aggarwal M, et al. Leuk Lymphoma. 2009 Oct;50(10):1699-708. doi: 10.1080/10428190903189035. Leuk Lymphoma. 2009. PMID: 19863341
Precision medicine needs pioneering clinical bioinformaticians.
Gómez-López G, Dopazo J, Cigudosa JC, Valencia A, Al-Shahrour F. Gómez-López G, et al. Brief Bioinform. 2019 May 21;20(3):752-766. doi: 10.1093/bib/bbx144. Brief Bioinform. 2019. PMID: 29077790 Free article. Review.
In vivo phosphoproteomics reveals kinase activity profiles that predict treatment outcome in triple-negative breast cancer.
Zagorac I, Fernandez-Gaitero S, Penning R, Post H, Bueno MJ, Mouron S, Manso L, Morente MM, Alonso S, Serra V, Muñoz J, Gómez-López G, Lopez-Acosta JF, Jimenez-Renard V, Gris-Oliver A, Al-Shahrour F, Piñeiro-Yañez E, Montoya-Suarez JL, Apala JV, Moreno-Torres A, Colomer R, Dopazo A, Heck AJR, Altelaar M, Quintela-Fandino M. Zagorac I, et al. Nat Commun. 2018 Aug 29;9(1):3501. doi: 10.1038/s41467-018-05742-z. Nat Commun. 2018. PMID: 30158526 Free PMC article.
vulcanSpot: a tool to prioritize therapeutic vulnerabilities in cancer.
Perales-Patón J, Di Domenico T, Fustero-Torre C, Piñeiro-Yáñez E, Carretero-Puche C, Tejero H, Valencia A, Gómez-López G, Al-Shahrour F. Perales-Patón J, et al. Bioinformatics. 2019 Nov 1;35(22):4846-4848. doi: 10.1093/bioinformatics/btz465. Bioinformatics. 2019. PMID: 31173067 Free PMC article.
The correlation between immune subtypes and consensus molecular subtypes in colorectal cancer identifies novel tumour microenvironment profiles, with prognostic and therapeutic implications.
Soldevilla B, Carretero-Puche C, Gomez-Lopez G, Al-Shahrour F, Riesco MC, Gil-Calderon B, Alvarez-Vallina L, Espinosa-Olarte P, Gomez-Esteves G, Rubio-Cuesta B, Sarmentero J, La Salvia A, Garcia-Carbonero R. Soldevilla B, et al. Eur J Cancer. 2019 Dec;123:118-129. doi: 10.1016/j.ejca.2019.09.008. Epub 2019 Nov 1. Eur J Cancer. 2019. PMID: 31678770 Free article.
DREIMT: a drug repositioning database and prioritization tool for immunomodulation.
Troulé K, López-Fernández H, García-Martín S, Reboiro-Jato M, Carretero-Puche C, Martorell-Marugán J, Martín-Serrano G, Carmona-Sáez P, Glez-Peña D, Al-Shahrour F, Gómez-López G. Troulé K, et al. Bioinformatics. 2021 May 1;37(4):578-579. doi: 10.1093/bioinformatics/btaa727. Bioinformatics. 2021. PMID: 32818254 Free article.
108 results