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High-Resolution Genomic Profiling of Carbapenem-Resistant Klebsiella pneumoniae Isolates: A Multicentric Retrospective Indian Study.
Nagaraj G, Shamanna V, Govindan V, Rose S, Sravani D, Akshata KP, Shincy MR, Venkatesha VT, Abrudan M, Argimón S, Kekre M, Underwood A, Aanensen DM, Ravikumar KL; NIHR Global Health Research Unit on Genomic Surveillance of Antimicrobial Resistance. Nagaraj G, et al. Among authors: aanensen dm. Clin Infect Dis. 2021 Dec 1;73(Suppl_4):S300-S307. doi: 10.1093/cid/ciab767. Clin Infect Dis. 2021. PMID: 34850832 Free PMC article.
Species Mash-up.
Argimón S, Aanensen DM. Argimón S, et al. Among authors: aanensen dm. Nat Rev Microbiol. 2016 Nov 11;14(12):730. doi: 10.1038/nrmicro.2016.175. Nat Rev Microbiol. 2016. PMID: 27833107 No abstract available.
Occurrence of carbapenemase-producing Klebsiella pneumoniae and Escherichia coli in the European survey of carbapenemase-producing Enterobacteriaceae (EuSCAPE): a prospective, multinational study.
Grundmann H, Glasner C, Albiger B, Aanensen DM, Tomlinson CT, Andrasević AT, Cantón R, Carmeli Y, Friedrich AW, Giske CG, Glupczynski Y, Gniadkowski M, Livermore DM, Nordmann P, Poirel L, Rossolini GM, Seifert H, Vatopoulos A, Walsh T, Woodford N, Monnet DL; European Survey of Carbapenemase-Producing Enterobacteriaceae (EuSCAPE) Working Group. Grundmann H, et al. Among authors: aanensen dm. Lancet Infect Dis. 2017 Feb;17(2):153-163. doi: 10.1016/S1473-3099(16)30257-2. Epub 2016 Nov 18. Lancet Infect Dis. 2017. PMID: 27866944 Free article.
Microreact: visualizing and sharing data for genomic epidemiology and phylogeography.
Argimón S, Abudahab K, Goater RJE, Fedosejev A, Bhai J, Glasner C, Feil EJ, Holden MTG, Yeats CA, Grundmann H, Spratt BG, Aanensen DM. Argimón S, et al. Among authors: aanensen dm. Microb Genom. 2016 Nov 30;2(11):e000093. doi: 10.1099/mgen.0.000093. eCollection 2016 Nov. Microb Genom. 2016. PMID: 28348833 Free PMC article.
Emergence and clonal spread of colistin resistance due to multiple mutational mechanisms in carbapenemase-producing Klebsiella pneumoniae in London.
Otter JA, Doumith M, Davies F, Mookerjee S, Dyakova E, Gilchrist M, Brannigan ET, Bamford K, Galletly T, Donaldson H, Aanensen DM, Ellington MJ, Hill R, Turton JF, Hopkins KL, Woodford N, Holmes A. Otter JA, et al. Among authors: aanensen dm. Sci Rep. 2017 Oct 5;7(1):12711. doi: 10.1038/s41598-017-12637-4. Sci Rep. 2017. PMID: 28983088 Free PMC article.
Phandango: an interactive viewer for bacterial population genomics.
Hadfield J, Croucher NJ, Goater RJ, Abudahab K, Aanensen DM, Harris SR. Hadfield J, et al. Among authors: aanensen dm. Bioinformatics. 2018 Jan 15;34(2):292-293. doi: 10.1093/bioinformatics/btx610. Bioinformatics. 2018. PMID: 29028899 Free PMC article.
Public health surveillance of multidrug-resistant clones of Neisseria gonorrhoeae in Europe: a genomic survey.
Harris SR, Cole MJ, Spiteri G, Sánchez-Busó L, Golparian D, Jacobsson S, Goater R, Abudahab K, Yeats CA, Bercot B, Borrego MJ, Crowley B, Stefanelli P, Tripodo F, Abad R, Aanensen DM, Unemo M; Euro-GASP study group. Harris SR, et al. Among authors: aanensen dm. Lancet Infect Dis. 2018 Jul;18(7):758-768. doi: 10.1016/S1473-3099(18)30225-1. Epub 2018 May 15. Lancet Infect Dis. 2018. PMID: 29776807 Free PMC article.
PANINI: Pangenome Neighbour Identification for Bacterial Populations.
Abudahab K, Prada JM, Yang Z, Bentley SD, Croucher NJ, Corander J, Aanensen DM. Abudahab K, et al. Among authors: aanensen dm. Microb Genom. 2019 Apr;5(4):e000220. doi: 10.1099/mgen.0.000220. Epub 2018 Nov 22. Microb Genom. 2019. PMID: 30465642 Free PMC article.
The phylogeography and incidence of multi-drug resistant typhoid fever in sub-Saharan Africa.
Park SE, Pham DT, Boinett C, Wong VK, Pak GD, Panzner U, Espinoza LMC, von Kalckreuth V, Im J, Schütt-Gerowitt H, Crump JA, Breiman RF, Adu-Sarkodie Y, Owusu-Dabo E, Rakotozandrindrainy R, Soura AB, Aseffa A, Gasmelseed N, Keddy KH, May J, Sow AG, Aaby P, Biggs HM, Hertz JT, Montgomery JM, Cosmas L, Olack B, Fields B, Sarpong N, Razafindrabe TJL, Raminosoa TM, Kabore LP, Sampo E, Teferi M, Yeshitela B, El Tayeb MA, Sooka A, Meyer CG, Krumkamp R, Dekker DM, Jaeger A, Poppert S, Tall A, Niang A, Bjerregaard-Andersen M, Løfberg SV, Seo HJ, Jeon HJ, Deerin JF, Park J, Konings F, Ali M, Clemens JD, Hughes P, Sendagala JN, Vudriko T, Downing R, Ikumapayi UN, Mackenzie GA, Obaro S, Argimon S, Aanensen DM, Page A, Keane JA, Duchene S, Dyson Z, Holt KE, Dougan G, Marks F, Baker S. Park SE, et al. Among authors: aanensen dm. Nat Commun. 2018 Nov 30;9(1):5094. doi: 10.1038/s41467-018-07370-z. Nat Commun. 2018. PMID: 30504848 Free PMC article.
154 results