Van Nostrand EL - Search Results

1

ADAR and hnRNPC deficiency synergize in activating endogenous dsRNA-induced type I IFN responses.

Herzner AM, Khan Z, Van Nostrand EL, Chan S, Cuellar T, Chen R, Pechuan-Jorge X, Komuves L, Solon M, Modrusan Z, Haley B, Yeo GW, Behrens TW, Albert ML. Herzner AM, et al. Among authors: van nostrand el. J Exp Med. 2021 Sep 6;218(9):e20201833. doi: 10.1084/jem.20201833. Epub 2021 Jul 23. J Exp Med. 2021. PMID: 34297039 Free PMC article.

2

Identification and analysis of alternative splicing events conserved in human and mouse.

Yeo GW, Van Nostrand E, Holste D, Poggio T, Burge CB. Yeo GW, et al. Proc Natl Acad Sci U S A. 2005 Feb 22;102(8):2850-5. doi: 10.1073/pnas.0409742102. Epub 2005 Feb 11. Proc Natl Acad Sci U S A. 2005. PMID: 15708978 Free PMC article.

3

Discovery and analysis of evolutionarily conserved intronic splicing regulatory elements.

Yeo GW, Van Nostrand EL, Liang TY. Yeo GW, et al. Among authors: van nostrand el. PLoS Genet. 2007 May 25;3(5):e85. doi: 10.1371/journal.pgen.0030085. Epub 2007 Apr 13. PLoS Genet. 2007. PMID: 17530930 Free PMC article.

4

Resources for the Comprehensive Discovery of Functional RNA Elements.

Sundararaman B, Zhan L, Blue SM, Stanton R, Elkins K, Olson S, Wei X, Van Nostrand EL, Pratt GA, Huelga SC, Smalec BM, Wang X, Hong EL, Davidson JM, Lécuyer E, Graveley BR, Yeo GW. Sundararaman B, et al. Among authors: van nostrand el. Mol Cell. 2016 Mar 17;61(6):903-13. doi: 10.1016/j.molcel.2016.02.012. Mol Cell. 2016. PMID: 26990993 Free PMC article.

5

Robust transcriptome-wide discovery of RNA-binding protein binding sites with enhanced CLIP (eCLIP).

Van Nostrand EL, Pratt GA, Shishkin AA, Gelboin-Burkhart C, Fang MY, Sundararaman B, Blue SM, Nguyen TB, Surka C, Elkins K, Stanton R, Rigo F, Guttman M, Yeo GW. Van Nostrand EL, et al. Nat Methods. 2016 Jun;13(6):508-14. doi: 10.1038/nmeth.3810. Epub 2016 Mar 28. Nat Methods. 2016. PMID: 27018577 Free PMC article.

6

Enhanced CLIP Uncovers IMP Protein-RNA Targets in Human Pluripotent Stem Cells Important for Cell Adhesion and Survival.

Conway AE, Van Nostrand EL, Pratt GA, Aigner S, Wilbert ML, Sundararaman B, Freese P, Lambert NJ, Sathe S, Liang TY, Essex A, Landais S, Burge CB, Jones DL, Yeo GW. Conway AE, et al. Among authors: van nostrand el. Cell Rep. 2016 Apr 19;15(3):666-679. doi: 10.1016/j.celrep.2016.03.052. Epub 2016 Apr 7. Cell Rep. 2016. PMID: 27068461 Free PMC article.

7

Experimental and Computational Considerations in the Study of RNA-Binding Protein-RNA Interactions.

Van Nostrand EL, Huelga SC, Yeo GW. Van Nostrand EL, et al. Adv Exp Med Biol. 2016;907:1-28. doi: 10.1007/978-3-319-29073-7_1. Adv Exp Med Biol. 2016. PMID: 27256380 Free PMC article.

8

SONAR Discovers RNA-Binding Proteins from Analysis of Large-Scale Protein-Protein Interactomes.

Brannan KW, Jin W, Huelga SC, Banks CA, Gilmore JM, Florens L, Washburn MP, Van Nostrand EL, Pratt GA, Schwinn MK, Daniels DL, Yeo GW. Brannan KW, et al. Among authors: van nostrand el. Mol Cell. 2016 Oct 20;64(2):282-293. doi: 10.1016/j.molcel.2016.09.003. Epub 2016 Oct 6. Mol Cell. 2016. PMID: 27720645 Free PMC article.

9

Protein-RNA Networks Regulated by Normal and ALS-Associated Mutant HNRNPA2B1 in the Nervous System.

Martinez FJ, Pratt GA, Van Nostrand EL, Batra R, Huelga SC, Kapeli K, Freese P, Chun SJ, Ling K, Gelboin-Burkhart C, Fijany L, Wang HC, Nussbacher JK, Broski SM, Kim HJ, Lardelli R, Sundararaman B, Donohue JP, Javaherian A, Lykke-Andersen J, Finkbeiner S, Bennett CF, Ares M Jr, Burge CB, Taylor JP, Rigo F, Yeo GW. Martinez FJ, et al. Among authors: van nostrand el. Neuron. 2016 Nov 23;92(4):780-795. doi: 10.1016/j.neuron.2016.09.050. Epub 2016 Oct 20. Neuron. 2016. PMID: 27773581 Free PMC article.

10

CRISPR/Cas9-mediated integration enables TAG-eCLIP of endogenously tagged RNA binding proteins.

Van Nostrand EL, Gelboin-Burkhart C, Wang R, Pratt GA, Blue SM, Yeo GW. Van Nostrand EL, et al. Methods. 2017 Apr 15;118-119:50-59. doi: 10.1016/j.ymeth.2016.12.007. Epub 2016 Dec 18. Methods. 2017. PMID: 28003131 Free PMC article.

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