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2DProts: database of family-wide protein secondary structure diagrams.
Hutařová Vařeková I, Hutař J, Midlik A, Horský V, Hladká E, Svobodová R, Berka K. Hutařová Vařeková I, et al. Bioinformatics. 2021 Dec 7;37(23):4599-4601. doi: 10.1093/bioinformatics/btab505. Bioinformatics. 2021. PMID: 34244700 Free PMC article.
Automated Family-Wide Annotation of Secondary Structure Elements.
Midlik A, Hutařová Vařeková I, Hutař J, Moturu TR, Navrátilová V, Koča J, Berka K, Svobodová Vařeková R. Midlik A, et al. Among authors: hutarova varekova i. Methods Mol Biol. 2019;1958:47-71. doi: 10.1007/978-1-4939-9161-7_3. Methods Mol Biol. 2019. PMID: 30945213
OverProt: secondary structure consensus for protein families.
Midlik A, Hutařová Vařeková I, Hutař J, Chareshneu A, Berka K, Svobodová R. Midlik A, et al. Among authors: hutarova varekova i. Bioinformatics. 2022 Jul 11;38(14):3648-3650. doi: 10.1093/bioinformatics/btac384. Bioinformatics. 2022. PMID: 35674374