Wan YW - Search Results

1

The bone microenvironment increases phenotypic plasticity of ER⁺ breast cancer cells.

Bado IL, Zhang W, Hu J, Xu Z, Wang H, Sarkar P, Li L, Wan YW, Liu J, Wu W, Lo HC, Kim IS, Singh S, Janghorban M, Muscarella AM, Goldstein A, Singh P, Jeong HH, Liu C, Schiff R, Huang S, Ellis MJ, Gaber MW, Gugala Z, Liu Z, Zhang XH. Bado IL, et al. Among authors: wan yw. Dev Cell. 2021 Apr 19;56(8):1100-1117.e9. doi: 10.1016/j.devcel.2021.03.008. Dev Cell. 2021. PMID: 33878299 Free PMC article.

2

Digital sorting of complex tissues for cell type-specific gene expression profiles.

Zhong Y, Wan YW, Pang K, Chow LM, Liu Z. Zhong Y, et al. Among authors: wan yw. BMC Bioinformatics. 2013 Mar 7;14:89. doi: 10.1186/1471-2105-14-89. BMC Bioinformatics. 2013. PMID: 23497278 Free PMC article.

3

Expression and functional pathway analysis of nuclear receptor NR2F2 in ovarian cancer.

Hawkins SM, Loomans HA, Wan YW, Ghosh-Choudhury T, Coffey D, Xiao W, Liu Z, Sangi-Haghpeykar H, Anderson ML. Hawkins SM, et al. Among authors: wan yw. J Clin Endocrinol Metab. 2013 Jul;98(7):E1152-62. doi: 10.1210/jc.2013-1081. Epub 2013 May 20. J Clin Endocrinol Metab. 2013. PMID: 23690307 Free PMC article.

4

Combinatorial therapy discovery using mixed integer linear programming.

Pang K, Wan YW, Choi WT, Donehower LA, Sun J, Pant D, Liu Z. Pang K, et al. Among authors: wan yw. Bioinformatics. 2014 May 15;30(10):1456-63. doi: 10.1093/bioinformatics/btu046. Epub 2014 Jan 24. Bioinformatics. 2014. PMID: 24463180 Free PMC article.

5

On the reproducibility of TCGA ovarian cancer microRNA profiles.

Wan YW, Mach CM, Allen GI, Anderson ML, Liu Z. Wan YW, et al. PLoS One. 2014 Jan 29;9(1):e87782. doi: 10.1371/journal.pone.0087782. eCollection 2014. PLoS One. 2014. PMID: 24489963 Free PMC article.

6

TCGA2STAT: simple TCGA data access for integrated statistical analysis in R.

Wan YW, Allen GI, Liu Z. Wan YW, et al. Bioinformatics. 2016 Mar 15;32(6):952-4. doi: 10.1093/bioinformatics/btv677. Epub 2015 Nov 14. Bioinformatics. 2016. PMID: 26568634

7

XMRF: an R package to fit Markov Networks to high-throughput genetics data.

Wan YW, Allen GI, Baker Y, Yang E, Ravikumar P, Anderson M, Liu Z. Wan YW, et al. BMC Syst Biol. 2016 Aug 26;10 Suppl 3(Suppl 3):69. doi: 10.1186/s12918-016-0313-0. BMC Syst Biol. 2016. PMID: 27586041 Free PMC article.

8

Comprehensive evaluation of RNA-seq quantification methods for linearity.

Jin H, Wan YW, Liu Z. Jin H, et al. Among authors: wan yw. BMC Bioinformatics. 2017 Mar 22;18(Suppl 4):117. doi: 10.1186/s12859-017-1526-y. BMC Bioinformatics. 2017. PMID: 28361706 Free PMC article.

9

Data Analysis Pipeline for RNA-seq Experiments: From Differential Expression to Cryptic Splicing.

Yalamanchili HK, Wan YW, Liu Z. Yalamanchili HK, et al. Among authors: wan yw. Curr Protoc Bioinformatics. 2017 Sep 13;59:11.15.1-11.15.21. doi: 10.1002/cpbi.33. Curr Protoc Bioinformatics. 2017. PMID: 28902396 Free PMC article.

10

Apparent bias toward long gene misregulation in MeCP2 syndromes disappears after controlling for baseline variations.

Raman AT, Pohodich AE, Wan YW, Yalamanchili HK, Lowry WE, Zoghbi HY, Liu Z. Raman AT, et al. Among authors: wan yw. Nat Commun. 2018 Aug 13;9(1):3225. doi: 10.1038/s41467-018-05627-1. Nat Commun. 2018. PMID: 30104565 Free PMC article.

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