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Nonlinear machine learning pattern recognition and bacteria-metabolite multilayer network analysis of perturbed gastric microbiome.
Durán C, Ciucci S, Palladini A, Ijaz UZ, Zippo AG, Sterbini FP, Masucci L, Cammarota G, Ianiro G, Spuul P, Schroeder M, Grill SW, Parsons BN, Pritchard DM, Posteraro B, Sanguinetti M, Gasbarrini G, Gasbarrini A, Cannistraci CV. Durán C, et al. Among authors: ijaz uz. Nat Commun. 2021 Mar 26;12(1):1926. doi: 10.1038/s41467-021-22135-x. Nat Commun. 2021. PMID: 33771992 Free PMC article.
Gut metabolome and microbiota signatures predict response to treatment with exclusive enteral nutrition in a prospective study in children with active Crohn's disease.
Nichols B, Briola A, Logan M, Havlik J, Mascellani A, Gkikas K, Milling S, Ijaz UZ, Quince C, Svolos V, Russell RK, Hansen R, Gerasimidis K. Nichols B, et al. Among authors: ijaz uz. Am J Clin Nutr. 2024 Apr;119(4):885-895. doi: 10.1016/j.ajcnut.2023.12.027. Epub 2024 Feb 19. Am J Clin Nutr. 2024. PMID: 38569785 Free PMC article.
intI1 gene abundance from septic tanks in Thailand using validated intI1 primers.
Okonkwo V, Cholet F, Ijaz UZ, Koottatep T, Pussayanavin T, Polpraset C, Sloan WT, Connelly S, Smith CJ. Okonkwo V, et al. Among authors: ijaz uz. Appl Environ Microbiol. 2023 Nov 29;89(11):e0107123. doi: 10.1128/aem.01071-23. Epub 2023 Oct 24. Appl Environ Microbiol. 2023. PMID: 37874304 Free PMC article.
Comparison of the human gastric microbiota in hypochlorhydric states arising as a result of Helicobacter pylori-induced atrophic gastritis, autoimmune atrophic gastritis and proton pump inhibitor use.
Parsons BN, Ijaz UZ, D'Amore R, Burkitt MD, Eccles R, Lenzi L, Duckworth CA, Moore AR, Tiszlavicz L, Varro A, Hall N, Pritchard DM. Parsons BN, et al. Among authors: ijaz uz. PLoS Pathog. 2017 Nov 2;13(11):e1006653. doi: 10.1371/journal.ppat.1006653. eCollection 2017 Nov. PLoS Pathog. 2017. PMID: 29095917 Free PMC article.
Binning metagenomic contigs by coverage and composition.
Alneberg J, Bjarnason BS, de Bruijn I, Schirmer M, Quick J, Ijaz UZ, Lahti L, Loman NJ, Andersson AF, Quince C. Alneberg J, et al. Among authors: ijaz uz. Nat Methods. 2014 Nov;11(11):1144-6. doi: 10.1038/nmeth.3103. Epub 2014 Sep 14. Nat Methods. 2014. PMID: 25218180
127 results