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Cryo-EM model validation recommendations based on outcomes of the 2019 EMDataResource challenge.
Lawson CL, Kryshtafovych A, Adams PD, Afonine PV, Baker ML, Barad BA, Bond P, Burnley T, Cao R, Cheng J, Chojnowski G, Cowtan K, Dill KA, DiMaio F, Farrell DP, Fraser JS, Herzik MA Jr, Hoh SW, Hou J, Hung LW, Igaev M, Joseph AP, Kihara D, Kumar D, Mittal S, Monastyrskyy B, Olek M, Palmer CM, Patwardhan A, Perez A, Pfab J, Pintilie GD, Richardson JS, Rosenthal PB, Sarkar D, Schäfer LU, Schmid MF, Schröder GF, Shekhar M, Si D, Singharoy A, Terashi G, Terwilliger TC, Vaiana A, Wang L, Wang Z, Wankowicz SA, Williams CJ, Winn M, Wu T, Yu X, Zhang K, Berman HM, Chiu W. Lawson CL, et al. Among authors: monastyrskyy b. Nat Methods. 2021 Feb;18(2):156-164. doi: 10.1038/s41592-020-01051-w. Epub 2021 Feb 4. Nat Methods. 2021. PMID: 33542514 Free PMC article.
Evaluation of residue-residue contact predictions in CASP9.
Monastyrskyy B, Fidelis K, Tramontano A, Kryshtafovych A. Monastyrskyy B, et al. Proteins. 2011;79 Suppl 10(Suppl 10):119-25. doi: 10.1002/prot.23160. Epub 2011 Sep 17. Proteins. 2011. PMID: 21928322 Free PMC article.
Evaluation of residue-residue contact prediction in CASP10.
Monastyrskyy B, D'Andrea D, Fidelis K, Tramontano A, Kryshtafovych A. Monastyrskyy B, et al. Proteins. 2014 Feb;82 Suppl 2(0 2):138-53. doi: 10.1002/prot.24340. Epub 2013 Aug 31. Proteins. 2014. PMID: 23760879 Free PMC article.
Assessment of protein disorder region predictions in CASP10.
Monastyrskyy B, Kryshtafovych A, Moult J, Tramontano A, Fidelis K. Monastyrskyy B, et al. Proteins. 2014 Feb;82 Suppl 2(0 2):127-37. doi: 10.1002/prot.24391. Epub 2013 Nov 22. Proteins. 2014. PMID: 23946100 Free PMC article.
CASP11 statistics and the prediction center evaluation system.
Kryshtafovych A, Monastyrskyy B, Fidelis K. Kryshtafovych A, et al. Among authors: monastyrskyy b. Proteins. 2016 Sep;84 Suppl 1(Suppl 1):15-9. doi: 10.1002/prot.25005. Epub 2016 Mar 9. Proteins. 2016. PMID: 26857434 Free PMC article.
29 results